KEGG   Helicobacter pylori Shi112: HPSH112_01620
Entry
HPSH112_01620     CDS       T02037                                 
Name
(GenBank) ATP-dependent protease binding subunit ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hhp  Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:hhp03110]
    HPSH112_01620
Chaperones and folding catalysts [BR:hhp03110]
 Heat shock proteins
  HSP100
   HPSH112_01620
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_22 Sigma54_activat AAA_16 bpMoxR AAA_7 AAA_18 Mg_chelatase AAA_14 nSTAND3 IstB_IS21 DNA_pol3_delta2 T2SSE TniB AAA_3 Torsin AAA_24 Zeta_toxin AAA_19 DUF3698 ResIII AAA_6
Other DBs
NCBI-ProteinID: AFI00545
Position
320417..322987
AA seq 856 aa
MNLFEKMTDQLHETLDSALALALHHKNAEVTPLHMLFVMLNNSQGILIQALQKMSVDIQA
LRLSVQSELDKFAKVSQINKQNIQLNQALIQSLENAQGLMAKTGDSFIATDVYLLANMSL
FESVLKPYLDTKQLQKTLESLRKGATIQSKNDDSNLESLEKFGIDLTQKALENKLDPVIG
RDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL
SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPAL
ARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNI
TINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLE
MEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFREISRLKMETESLK
KEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQHKWEAMQQNGALLQNALTENNIAEIV
SQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKAIKAIAKAIKRNKAGLSDSNKPIGS
FLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYEEGG
QLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV
ASGALLEENLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAVANIVGILFENI
QKKALERGINITLDEEAKELIAKAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKEND
SVAFVVENNEIVPKIK
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgaatttatttgaaaaaatgactgaccaattgcatgaaactttagacagcgcgctcgct
ctagctttacaccataaaaacgctgaggtaacgcccttgcacatgctttttgtcatgctc
aataactcccaaggcatcctcattcaagccttacaaaaaatgtctgtggatattcaagcc
ttaaggcttagcgttcaaagcgagttggataagtttgctaaagtttcacaaatcaacaag
caaaacatccaattaaaccaagctttaatccaaagtttagaaaacgctcaaggcttgatg
gctaaaacgggcgactcttttatcgctacagatgtgtatcttttggcgaacatgagcctt
tttgaaagcgttctaaaaccttatttagacactaagcaattgcaaaaaactttagaatct
ttgagaaaaggcgcgactatccaaagtaaaaacgatgattctaatttggaaagtttggaa
aaatttggcattgatttgacgcaaaaagccttagaaaataagctcgatccggtgattggg
agggatgaagaaatcattcgcatgatgcaaattttgataagaaaaacaaaaaataaccct
attttactaggtgagcctggagtggggaaaacggcggttgtggagggtttagcccaacgc
attgtgaataaggaagtgcctaaaacgcttttaaacaaacgagtcgtcgctttagattta
agcttattggtggctggagccaaatacagaggcgagtttgaagagcgtttgaaaaaggtg
attgaagaagttaaaaaaagcgcgaatgtgattttattcattgatgaaatccacacgatc
gtaggggctggagctagtgaggggggcatggatgcggctaatatcttaaaacccgcgctc
gctaggggggaattgcacacgattggagcgaccactttgaaagaataccgcaagtatttt
gaaaaagacatggcactacaaaggcgtttccaacccattttactcaatgagcctagcatc
aatgaagccttacagattttaagagggttaaaagaaactttagaaacgcaccataatatc
accatcaatgactccgcgctcatagcgagcgccaaactctctagccgttatatcaccgat
aggtttttacccgataaagcgattgatttgattgatgagggggcggctcaattaaaaatg
caaatggaatccgagccggcaaaactctctagcgttaagcgctccattcaaagattggaa
atggaaaaacaagcccttgaaatggaaaaaaaagagagcaatgccaaacgcatgcaagaa
atccttaaagaattgagcgatttgaaagaagaaaaaatccaattagaagcgcaatttgaa
aacgaaaaagaagtgtttagagaaatttcacgcttgaaaatggaaacggaaagcttgaaa
aaagaggctgagaggtttaagcgcaatggggattaccagcaagcgggtgaaattgaatac
tctaaaatccctgaaaataaaaagaaagaagaagaattgcagcacaaatgggaagcgatg
caacaaaacggggcgttattgcaaaacgctttaaccgaaaacaacatcgctgagatcgtg
agccaatggacgcatatcccggtccaaaaaatgctccagagcgaaaaaaatagggtttta
aacattgaaagcgaattgcaaaaaagagtggtggggcaagaaaaagcgatcaaagcgatc
gctaaagcgattaaaaggaataaggccgggcttagcgatagcaataaacccatagggagt
tttctctttttagggccaacgggcgtgggtaaaaccgagagcgctaaagctttggcgcaa
ttcttgtttgatagcgataaaaatcttataagaattgacatgagcgaatacatggaaaaa
catgccataagccgtcttattggggccgctcctgggtatgtgggctatgaagaaggcggg
caattgaccgaagcggtgcgcagaaaaccctatagcgtggtgctgttagatgaagtggaa
aaagcccatccggatgtgtttaatctcttgttgcaggttttagatgaagggcatttaacc
gatagtaagggcgtgagggtggatttcaaaaacacgattttgattttaaccagcaatgtg
gctagcggcgcgcttttagaagaaaatttgagtgaagccgataaacaaaaagcgatcaaa
gagagtttgaggcaattcttcaagccggaatttttaaaccgcttagatgaaatcatctcc
tttaacgccctagatagccatgctgtcgctaatatcgtggggattctctttgaaaacatt
caaaaaaaagcgcttgaaagaggcattaatataaccctagacgaagaagcaaaagaattg
atcgccaaagcgggatttgacagattctatggcgctagacccttgaagcgcgcgctctat
gaaatggtagaagacaagctcgctgaactcattttagaggataaaattaaagagaatgac
agcgtggcgtttgtggtagaaaataacgaaattgtgcctaagattaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (33)   

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