KEGG   Haliscomenobacter hydrossis: Halhy_3596
Entry
Halhy_3596        CDS       T01491                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hhy  Haliscomenobacter hydrossis
Pathway
hhy03030  DNA replication
hhy03430  Mismatch repair
hhy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Halhy_3596
   03430 Mismatch repair
    Halhy_3596
   03440 Homologous recombination
    Halhy_3596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhy03032]
    Halhy_3596
   03400 DNA repair and recombination proteins [BR:hhy03400]
    Halhy_3596
Enzymes [BR:hhy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Halhy_3596
DNA replication proteins [BR:hhy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Halhy_3596
DNA repair and recombination proteins [BR:hhy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Halhy_3596
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 RuvB_N Rad17 AAA_5 AAA_14 Mg_chelatase AAA_19 ResIII AAA_2 AAA_30 AAA_24 AAA_16 TIP49 DEAD AAA_7 iSTAND AAA_18 RNA_helicase T2SSE DNA_pol3_delta AAA_assoc_2 nSTAND3 DUF815 Sigma54_activ_2 AAA_33 SRP54
Other DBs
NCBI-ProteinID: AEE51448
UniProt: F4KYQ6
Position
complement(4523452..4525221)
AA seq 589 aa
MSNFVVSARKYRPVTFEDVVGQEHVTNTLKNALRNDHLAHAFLFCGPRGVGKTTCARILA
KVINCQNPSPELEPCNTCSSCTSFNDNASFNISELDAASNNSVEHIRALIEQVRFQPQQG
KYKVFIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTEKHKIIPTILSRCQIFDFKRI
QAPAMVRHLQGISTKENITANEEALHVIAQKADGALRDALSIFDRIVSYSGSHINYEDVI
LNLNVLDYDYYFKIVDALLVEDLAQVMLLFDEILNKGFESDIFINGLAEHLRNVLMCKDP
QTISLLELTDNLKERYRTQAHISPSSFLLTALNLCNDCDINYRMARNRRLHVEMALIKMT
YINRAVEISAGAAEKKNPESDVTPIEPVSSTPIQTTTAPNIPAKKTGNSAPAERNETVPE
QGSSATPSQQTEPTPAHLVSTPRIGRLDDLMAEVHAETEHSAAQPVLVITQESIEKAWAG
YLTKVEQETTRNILNNIPLHWADPVLTAKVGSNLVESTLRQERNLMEHLRQVFGRKDLIL
QIDLEKTLASEKTKPVRPLNNKERLLAMYEKNPQVKDLAEKFGLRFDGD
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgagtaattttgtcgtttcggctcgcaagtatcgcccagtcaccttcgaggatgtcgtg
ggtcaagaacacgtgaccaataccctcaaaaatgccctgcgcaatgatcacctggcgcat
gcgtttttgttttgcggcccaaggggggtaggcaaaacgacatgtgcccggatcctggcc
aaagtcatcaactgtcaaaaccccagcccagagctggagccttgcaatacttgctcttct
tgtacttctttcaatgacaatgcttctttcaacatttcggaattggatgcggcctccaac
aatagtgtggagcacatccgggccctgattgaacaggtgcgttttcaacctcagcaaggt
aagtataaagtatttatcattgacgaggtgcacatgctttctcaacaggcttttaatgct
tttttaaaaaccctggaagaaccaccgagctacgccatttttattctggcgactaccgaa
aaacacaaaatcattccgaccattctatcccggtgtcagatttttgatttcaaacgcatt
caggctcccgcgatggtgcggcatttgcaaggcatcagcaccaaagagaacataaccgcc
aacgaagaagccttgcacgtcattgcccaaaaagccgatggagccttacgcgatgccctg
tctatttttgaccgtattgtatcctactcgggaagccacatcaactatgaagatgtgatc
ctgaatctcaacgtattggactacgattattatttcaaaattgtagatgccctgctggta
gaagacctggctcaagtgatgttgctgtttgacgagatcctgaacaagggttttgaatct
gatatttttatcaatggcctggccgaacatttgcggaatgtactcatgtgtaaagatccc
caaaccatcagtttgctggagcttaccgataatttaaaggaacgttaccgcacccaggca
cacatttcacccagctcctttttgctcactgcgctgaatctctgcaacgattgtgacatc
aattaccgcatggcccgcaacaggcgattgcatgtggaaatggccctcatcaaaatgact
tacatcaatcgggcagtagaaatttccgcaggcgcggctgaaaaaaaaaatcctgagtcc
gatgtaacgcccattgaaccagtttcaagtacgcctatccagacaacaacggctccaaac
ataccggccaaaaaaacgggcaatagcgcccctgctgagcgcaatgaaaccgtcccggag
caaggttccagcgctacacccagtcaacaaaccgagccaacacccgcacatttggtttcg
acaccccgcattggacgtttggatgacctcatggcggaggtacacgccgaaacggaacat
tccgccgcccaacccgtactcgtcatcacgcaggaaagtatcgaaaaagcctgggccgga
taccttaccaaagttgaacaagaaactacccgcaatatcctgaacaacattccattgcat
tgggctgatccagtcttaaccgccaaagttggctcaaatctggttgaaagtaccttgcgc
caggaacgcaacttgatggaacacctgcgccaggtttttggccgcaaagacctcatttta
caaattgacctggaaaaaactttggccagcgaaaaaaccaaacccgtccgaccactcaac
aacaaagaacgtttgctggcgatgtacgaaaaaaacccccaggtgaaagacttggctgaa
aaattcggcctgcgttttgacggggattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (66)   

Download RDF
DBGET integrated database retrieval system