KEGG   Haemophilus influenzae KR494 (serotype f): HifGL_001123
Entry
HifGL_001123      CDS       T02839                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
hik  Haemophilus influenzae KR494 (serotype f)
Pathway
hik03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hik00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HifGL_001123 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hik03400]
    HifGL_001123 (sbcB)
Enzymes [BR:hik01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     HifGL_001123 (sbcB)
DNA repair and recombination proteins [BR:hik03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HifGL_001123 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HifGL_001123 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HifGL_001123 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AGV11936
Position
1138230..1139651
AA seq 473 aa
MAKDFSFFIYDYESFGVNPAIDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAAKILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
ADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMAPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRANLYTKKSELEERSVPPVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVTDIFNEERQFASNDN
VETELYNGFFSNADKNNMSILRSLPAEKLSEHGLAFEDKRIPELLFHYRARHFYKTLTRA
EQIKWQKYRQNKLEKSAVDFESSLQRLAEEHSDNPEKLSLLQQVYEYGTKLLG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatcctgca
atagatcgtcctgcgcaatttgcgggtattcgtacggatgctgattttaatatcattggt
aaaccaataatgttttattgtaaacaaaccaacgattatttaccggctcctgaagccgta
atggtaacaggaattacgccacaagaatgtaatgaaaaggggctttcagagcctgaattt
gccgcaaaaattctagctgagttttcccaacccaatacttgtgtcatgggctataacaat
attcgctacgatgatgaaatgacgcgttatacgttttatcgtaattttattgatccttac
gaatacagctggaaaaacgggaattctcgctgggatttgttagatttagtgcgagcttgt
tatgccttgcgtccagaagggattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcatgatgcaatg
gcggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaatcgcggtaaaaaagaaatcgaaaaattggttgatacagga
gcaatggcacctttagtacatgtttctgggatgttagggaattatcgtggaaattgcact
tgggttgcccctttagcttggcatccgacaaatcaaaatgcacttattgtttgtgattta
actggcgatatcgataatttattagccaaaagtgcggatgaattacgggcgaatttatat
acaaaaaaatcagaattagaagaaaggagcgttccacctgttccattaaaactcgtacat
attaataaatgccctattttagcgccagccaaaaccttgttgccagaaacagcaaatcgc
ttgggtattgatcgtcaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtgacggatatttttaatgaagaacgtcaatttgcatcgaatgataat
gtagaaactgagctatataatggctttttcagcaatgctgataaaaataatatgtctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccctgaattattgttccattatcgagctcgccatttttataaaacccttacacgcgct
gaacaaattaaatggcagaaatatagacagaataaacttgaaaaaagtgcggtagatttt
gaatcaagtttacaacgtttagcagaggaacattcagataatcctgaaaaactatctttg
ttacaacaagtatatgaatatggtacaaaactactaggttag

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