KEGG   Haemophilus influenzae PittEE (nontypeable): CGSHiEE_03325
Entry
CGSHiEE_03325     CDS       T00543                                 
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hip  Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CGSHiEE_03325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hip03021]
    CGSHiEE_03325
   03400 DNA repair and recombination proteins [BR:hip03400]
    CGSHiEE_03325
Enzymes [BR:hip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CGSHiEE_03325
Transcription machinery [BR:hip03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CGSHiEE_03325
DNA repair and recombination proteins [BR:hip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CGSHiEE_03325
SSDB
Motif
Pfam: RNA_pol_Rpb6 Phage_T7_Capsid
Other DBs
NCBI-ProteinID: ABQ98090
UniProt: A5UBD9
Position
668209..668475
AA seq 88 aa
MARVTVQDAVEKIGNRFDLILTAARRARQLQLNQSVPLVPEDNDKPTVIALREIEKGLIN
QDIMDAQEFQKMAKVQETEEAAVALITE
NT seq 267 nt   +upstreamnt  +downstreamnt
atggctcgtgttactgtgcaagatgcggtagaaaaaattggtaaccgttttgatttaatt
ttaacggcagcgcgtcgtgcaagacaattacaacttaaccaaagtgtgccgttagtgcca
gaagataatgacaaaccaacagtaattgcattacgtgaaatcgaaaaaggtttgattaat
caagatattatggatgcacaagaattccaaaaaatggcgaaagtgcaagaaacggaagaa
gcagctgttgcattaattacagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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