KEGG   Heterobasidion irregulare: HETIRDRAFT_166594
Entry
HETIRDRAFT_166594 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
hir  Heterobasidion irregulare
Pathway
hir03030  DNA replication
hir03410  Base excision repair
hir03420  Nucleotide excision repair
hir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HETIRDRAFT_166594
   03410 Base excision repair
    HETIRDRAFT_166594
   03420 Nucleotide excision repair
    HETIRDRAFT_166594
   03430 Mismatch repair
    HETIRDRAFT_166594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_166594
   03036 Chromosome and associated proteins [BR:hir03036]
    HETIRDRAFT_166594
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_166594
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    HETIRDRAFT_166594
  DNA Replication Termination Factors
   ELG1-RFC complex
    HETIRDRAFT_166594
Chromosome and associated proteins [BR:hir03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    HETIRDRAFT_166594
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     HETIRDRAFT_166594
  Check point factors
   HRAD17(Rad24)-RFC complex
    HETIRDRAFT_166594
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 nSTAND3 AAA_16 AAA_3 RuvB_N Viral_helicase1 Rad17 Mg_chelatase DNA_pol3_delta Gp44_lid AAA_assoc_2 MeaB AAA_19 AAA_24 RNA_helicase NTPase_1 SRP54 AAA_11
Other DBs
NCBI-GeneID: 20668067
NCBI-ProteinID: XP_009541012
JGI: Hetan2_166594
UniProt: W4KPT0
Position
Unknown
AA seq 343 aa
MSSTAVTKGKVPINGTDVPYELPWVEKYRPNVLDDVVGNSDTVERLKVIATDGNVPHLII
SGLPGIGKTTSIHCLAHQLLGDAYKEGVLELNASDERGIDVVRNKIKAFAQKKVTLPPGR
HKIVILDEADSMTAGAQQALRRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYSKLR
DAEILQRLLEICEMEKVEYNDDGLTALIFTSEGDMRQAINNLQSTWSGFGFVSGDNVFKV
CDQPHPIIVQTIIRACLKGDIDMALERMSELWHQGYSAVDIIVTIFRVVKTFDEIPEYTK
LEYIKEIGFTHMRILEGVGTLIQLGGLMARLCKINIKPELFRL
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgtcttccacagcggtgaccaagggcaaagtacccatcaacggaacagacgttccctac
gagctgccatgggtggaaaaatatagaccaaacgtcctggacgatgtcgtcggaaactcg
gacacggtggaacggttaaaagtcatcgcgacagatggaaacgttcctcatctcatcatc
tcaggactaccaggtattggaaagactacaagtattcactgcctcgcacatcaactgtta
ggagatgcttacaaggagggtgtgctggaattgaatgcttccgacgaacgaggaattgac
gttgtccggaataaaatcaaggcctttgcacagaagaaagtcacactgccaccaggccgc
cacaagatagtgattctagacgaagccgacagcatgacggccggtgcccaacaggcactt
cgccgaacgatggagatcttctccaacacaacgcgcttctgcttggcctgtaacatgtca
aataaaatcatagaacccattcaaagtcgatgtgccattctccggtacagcaaattacgc
gacgcagagatcttgcagcgtcttctggagatctgtgagatggagaaggtcgagtacaat
gacgacggccttacagcgctcatttttacgtcggaaggggacatgcgtcaggcaataaat
aatctccaatcaacatggtctggatttggattcgtctccggcgacaacgtcttcaaagtg
tgcgatcagccgcaccctatcattgttcagaccatcatccgggcgtgcttgaaaggtgat
atcgacatggctttggaaagaatgtcagagctctggcaccaaggctacagtgctgtggat
atcatcgtgacaatcttccgagttgtgaagacatttgacgagataccggaatacacgaag
ctagagtacattaaggagattggcttcacacacatgcgtattctcgaaggcgtaggaact
ttgattcaactcggggggctcatggctcgtctttgtaaaattaacattaagccagagctt
ttccggctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (52)   

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