KEGG   Haemophilus influenzae 10810 (serotype b): HIB_03030
Entry
HIB_03030         CDS       T01720                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hiu  Haemophilus influenzae 10810 (serotype b)
Pathway
hiu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HIB_03030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hiu03019]
    HIB_03030
   03016 Transfer RNA biogenesis [BR:hiu03016]
    HIB_03030
Enzymes [BR:hiu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     HIB_03030
Messenger RNA biogenesis [BR:hiu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HIB_03030
Transfer RNA biogenesis [BR:hiu03016]
 Prokaryotic type
  tRNA degradation factors
   HIB_03030
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2 SLS1_KH2
Other DBs
NCBI-ProteinID: CBW28492
Position
complement(320675..322804)
AA seq 709 aa
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFIDNQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVIEAIKEFAKEAGKPRWDWVAPQPNTD
LINKVKAIAEARLGDAYRITEKQLRYEQIDAIKADVIAQITAEDEEISEGKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGERQDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAI
PAPRADISDYAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAAVD
SNAAKNVMGRIEEIVAEVEAGAIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVNVKVVEIDRQGRIRLTMKDLAPKQETEINQEDPVEEQE
NT seq 2130 nt   +upstreamnt  +downstreamnt
gtgaatccaattgttaaacaatttaaatacggtcagcataccgttactctagaaactggc
gcgattgcacgtcaagcaacggctgcggttatggcaagcatggacgataccacggtattc
gtgactgttgttgctaaaaaagatgtgaaagaaggtcaagacttcttcccattaaccgta
aactatcaagagcgtacttatgcggcgggtaaaatccctggtggtttcttcaagcgtgaa
ggtcgtccatctgaaggcgaaactttaattgcacgtttaatcgaccgtccaattcgtcca
ttattcccagaaggtttcttcaatgaaatccaagttgtggcaactgtggtttctgtaaac
ccacaaatcagcccagacttagtggcaatgatcggtgcttctgcagcattaaccttatct
ggtgtgcctttcaacggccctatcggtgcagcgcgtgttggttttatcgacaaccaattc
gtattaaacccaactatggcagaacaaaaacaaagccgtttggacttagtggttgccggt
actgacaaagccgtattaatggttgaatctgaagctgatattttaactgaagaacaaatg
ttagcggcagtcgtattcggtcatcaacaacaacaagttgtgattgaagcaatcaaagaa
tttgcaaaagaagcgggcaaaccacgttgggattgggttgcaccacaaccaaacacagat
ttaatcaacaaagtaaaagcgattgctgaagcacgtttaggcgatgcataccgcattact
gaaaaacaattacgttacgaacaaatcgatgcgattaaagcggatgtaattgcgcaaatc
acagctgaagatgaagaaatcagcgaaggtaaaatcgtggatattttcaccgcacttgaa
agccaaatcgttcgtggccgtatcattgcaggcgaaccacgtattgatggtcgtaccgtt
gatactgttcgtgcattagatatttgcactggtgtattaccacgtactcacggttctgca
attttcacccgtggcgaaacgcaagcattagctgttgcaaccttaggtaccgaacgtgat
gcacaaatcattgatgaattaacgggtgaacgtcaagatcacttcttattccattataat
ttccctccatattctgtaggcgaaacaggtatgatcggctcgccaaaacgtcgtgagatc
ggtcacggtcgtttagcaaaacgtggtgtagcggctgttatgccaagccttgcagaattc
ccgtatgttgtgcgtgtagtatctgaaatcactgaatctaacggttcttcttctatggcc
tctgtatgtggtgcatctttagcattaatggatgcaggtgttccaatcaaagctgcggtt
gcaggtatcgcaatgggtttagtgaaagaagaagagaaatttgtggtgctttcagatatt
ttaggcgatgaagaccatttaggcgatatggactttaaagtagcgggtacacgcgaaggt
gtcaccgcacttcaaatggacatcaaaattgaaggtatcacccctgaaattatgcaaatt
gcattaaaccaagcgaaaagtgcacgtatgcacattcttggtgtaatggaacaagcaatc
cctgctccacgtgcggatatttctgactacgcaccgcgcatctatacaatgaaaatcgat
cctaagaaaatcaaagatgtgattggtaaaggtggtgcaacaatccgttcactaactgaa
gaaactggtacatcaattgatattgatgacgatggtacagtgaaaattgccgcagtagat
agcaatgcagcgaaaaacgtaatgggacgtattgaggaaatcgttgcagaagttgaagct
ggcgcaatttacaaaggtaaagtcactcgtcttgctgattttggtgcattcgtcgcaatc
gttggaaataaagaaggtttggttcatatttctcaaattgctgaagagcgtgtagaaaaa
gttagcgattaccttcaagtgggtcaagaagtaaacgtaaaagttgttgaaatcgatcgt
caaggtcgtattcgtttaacaatgaaagacttggctccaaaacaagaaactgaaattaac
caagaagatcctgtcgaagaacaggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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