KEGG   Haemophilus influenzae 723: NTHI723_00748
Entry
NTHI723_00748     CDS       T03722                                 
Symbol
rnr
Name
(GenBank) Ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
hix  Haemophilus influenzae 723
Pathway
hix03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hix00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NTHI723_00748 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hix03019]
    NTHI723_00748 (rnr)
   03016 Transfer RNA biogenesis [BR:hix03016]
    NTHI723_00748 (rnr)
Enzymes [BR:hix01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     NTHI723_00748 (rnr)
Messenger RNA biogenesis [BR:hix03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NTHI723_00748 (rnr)
Transfer RNA biogenesis [BR:hix03016]
 Prokaryotic type
  tRNA degradation factors
   NTHI723_00748 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 HTH_12 RNA_pol_Rbc25 OB_Dis3 Rpn9_C
Other DBs
NCBI-ProteinID: AJO91208
UniProt: A0A2S9S5C0
Position
776407..778755
AA seq 782 aa
MTKKRKNLISQDPHYKRELEKYGNPIPSREFILSVIRDNNAPMNRDEILTALSIRNEEQI
EAMRRRLRAMENDGQLVFTKRKRYALPEKLDLFKGTVIGHREGFGFLQVDGKKDDLFIPN
HQMQRVMHGDFVLAQLAGLDRRGRREVRIVRVLESRKKQIVGRFFLENGFGYVVPDDSRI
GRDILVPNEHRNGARMGQVVVVELQERSASFNQPIGVITEILGDNMAKGMEVEIALRNHD
IPHKFPSAVEKYVKKFTEEVPEEAKKGRVDLRNLPLVTIDGEDARDFDDAVYCEKHGKGW
KLWVAIADVSYYVRLRSALDVEAHNRGNSVYFPNRVVPMLPEILSNGLCSLNPQVDRLCM
VCEMQISAKGKLTDYRFYEAVMNSHARLTYTKVAKMLEGDEELRTRYSTLVPHLEELYKL
YQALLGARHQRGAIDFETIETKFIFNAMGRIERIEPVVRNDAHKIIEECMILANIAAANF
MEKHKEPALYRIHATPSKEKLTSFRAFLGEFGLTLEGGLKPTTKDYATLLEQVKERSDHE
LIQTMLLRSLSQAVYHADNIGHFGLALEEYAHFTSPIRRYPDLTLHRGIKYLLAKEQGAK
RKTTDTGGYHYSFDEMDLLGNHCSMTERRADDATREVADWLKCEYMQDHVGGEFSGVISS
VTGFGLFVRLDDLFIDGLVHISTLENDYYQFDAAKQRLIGENSRMQYRLGNKVRIKVEAV
HLENKMVDFSLMGSERKPRRAGKTAKEKAKKVFKELPSKTSQKRKSAVKKKDVLKKASRK
RK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgacaaaaaaacgtaaaaacttaatcagccaagatcctcattacaaacgagaattggaa
aaatacggcaatccaatcccgagccgtgaatttattttaagcgttattcgagacaataat
gcaccgatgaatcgggatgaaattttgaccgcactttccattcgaaatgaagagcaaata
gaagcgatgcgtcgccgattacgcgcgatggaaaatgatggccaattagtgttcaccaaa
cgtaaacgctatgccttaccagaaaaattagatttatttaaaggcacggtaattggtcat
cgcgaaggttttggttttttacaggtcgatggcaaaaaggatgatttattcattccaaac
catcaaatgcaaagagtcatgcatggagattttgtcttagcgcaacttgctggattagat
cgtcgtggtcgccgtgaagtgcgaattgtgcgcgtattagaaagccgtaaaaaacaaatt
gtgggtcgttttttcttagaaaacggttttggctatgtagtgcctgatgacagcagaatt
ggcagagatattctcgtgcctaatgaacatcgtaatggtgctcgcatgggacaagttgtg
gttgtcgagttgcaagaacgttctgccagttttaaccagccaattggcgtgatcactgaa
atcctaggcgataatatggcgaaaggaatggaagtggaaatcgccttgcgtaaccacgat
attccccataagtttccaagtgcggtggaaaaatacgtaaaaaaattcactgaagaagtg
cctgaagaagcaaaaaaaggccgtgtggatttacgcaatttaccgcttgtgaccattgat
ggcgaagatgcgcgggattttgatgatgccgtttattgtgaaaaacatggcaaaggctgg
aaactttgggtggcgattgcggatgttagttattacgtacgtttacgttccgctttggat
gtagaagcgcataatcgtggtaactcggtctattttccgaaccgagttgtaccaatgcta
cctgaaattttatccaacggcttatgctctctgaacccacaagtggatcgtttgtgtatg
gtttgtgagatgcaaatttctgccaaaggtaagctcacagattatcgcttttatgaagcg
gtgatgaattctcacgcccgcctcacttataccaaagtcgcaaaaatgcttgagggcgat
gaagaattacgcactcgttattctacgctggtgcctcatttagaagaactttataaactc
tatcaagctttacttggtgcgcgtcatcaacgtggtgcgatcgattttgaaaccattgaa
actaagtttattttcaatgcaatggggagaattgagcgtattgaacccgttgttcgtaac
gatgcccacaaaatcattgaggaatgtatgattcttgcgaatatcgcagcagccaatttt
atggaaaaacataaagagcctgcgttatatcgtattcatgccaccccgagcaaagaaaaa
ttaacatcgttccgcgcttttttaggtgagtttggtttaactttagaaggtggattgaag
ccaaccacaaaagactatgctactctcttagaacaagttaaagaacggtctgatcatgaa
cttattcaaacaatgttgctacgttcattaagtcaagccgtctatcacgctgataatatt
gggcactttggtttggctttggaagagtatgcacactttacttcgccaattcgccgttat
cctgacttaacacttcatcgaggcatcaaatatttactcgctaaagaacaaggcgcaaaa
cgtaaaaccaccgatacaggcggttatcattactcttttgatgaaatggatttacttggc
aatcactgttcaatgacggaacgccgtgccgacgacgcaactcgtgaagtggctgattgg
ctgaaatgtgaatatatgcaagatcatgtcggtggcgaatttagcggtgttatttcatct
gtgacgggatttggtttatttgtacgcttagatgatttattcatcgatggtttagtccat
atttccaccttagaaaacgattattaccaattcgatgcagcaaaacagcgtttaattggc
gaaaatagcagaatgcaatatcgcttaggcaataaagttcgtatcaaagttgaagcagta
catttagaaaataaaatggtcgatttctcgctgatggggagtgaacgtaaacctcgtcgt
gctggaaaaacggcgaaagaaaaagccaagaaagtctttaaagaactaccgtctaaaaca
tcccagaaacgaaaaagtgcggtaaaaaagaaagatgttttgaagaaagcatctagaaaa
cgaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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