KEGG   Halioglobus japonicus: BST95_06475
Entry
BST95_06475       CDS       T04687                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
hja  Halioglobus japonicus
Pathway
hja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BST95_06475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hja03021]
    BST95_06475
   03019 Messenger RNA biogenesis [BR:hja03019]
    BST95_06475
Transcription machinery [BR:hja03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BST95_06475
Messenger RNA biogenesis [BR:hja03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BST95_06475
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 NACHT Mor AAA_22
Other DBs
NCBI-ProteinID: AQA17934
UniProt: A0A2N5YBY2
Position
complement(1352804..1354072)
AA seq 422 aa
MNLTDLKNKPTQELIDIAKEMGIENMARSRKQDIIFAILKRHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDSERYFALLKVGEVN
FSKPEQSKNKILFENLTPLFPDERLTLEKGNGSSEDLTGRIIDLVAPIGKGQRGLLVAPP
KAGKTIMMQNIAQAIISNNPECYIIVLLIDERPEEVTEMQRSVGARGAEVVASTFDEPPS
RHVQVADMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERP
KRFFGAARNIEEGGSLSIIATALINTGSKMDEVIYEEFKGTGNMELHLDRKVAEKRVYPA
INIRSSGTRREELLTGDEELQRMWILRKLLHGMEDLPAVEFLIDKLKDTKTNDEFFLSMK
RK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatcttactgatctgaagaacaaacccacccaggaactcatcgatattgccaaggag
atgggcattgaaaacatggcccgctcacggaagcaggacatcatctttgccattctcaag
cgacacgccaaaagcggtgaagatatctacggtgacggtgtattggaaattctccaggac
ggcttcggcttcctgcgcagcgctgacagctcttacctggctggccccgacgacatttat
gtctcgccgagccagatccgccgcttcaacttgcgcaccggcgacaccatttccggcaag
attcgcccgccgaaagattccgagcgctacttcgcattgctcaaggttggcgaggttaac
ttcagtaaacctgaacaatccaagaacaagatcctgttcgaaaacctgacgccgctgttc
ccggatgagcgcctgactcttgaaaagggcaacggcagctccgaggacctcaccggccgc
atcatcgacctggtggccccgattggtaaaggccagcgtggcctgttagtagcaccgccc
aaggccggtaaaaccatcatgatgcagaacatcgcccaggcgattatcagcaacaaccct
gagtgctacatcatcgtactgctgatcgacgagcgtcccgaagaagtgacagagatgcag
cgctctgtcggtgcccgcggtgccgaggtcgttgcgtcgaccttcgatgagccaccctcg
cgccacgtgcaggtggcggatatggttatcgaaaaggccaagcgcctggtggagcacaag
cgtgacgttgtgatcctgctcgactccatcacccgtctggcacgtgcgtacaacacggtt
atcccctcgtccggcaaggtacttaccggtggtgtagacgcccacgctctggaacgcccc
aagcgcttctttggcgccgcgcggaacatcgaggaaggcggcagcctgtccatcatcgct
accgccctgatcaataccggctccaaaatggacgaggtgatttacgaggagttcaagggc
accggtaacatggaactgcatctggatcgcaaggtggctgaaaagcgcgtgtatcccgca
atcaacatccgctcttccggcactcgccgcgaagaactgctgaccggcgatgaagaactg
cagcgcatgtggatcctgcgcaagctgctgcacggcatggaagatctgcccgcggtggaa
ttcctgatcgacaagctcaaggacaccaagaccaacgacgagttcttcctgtccatgaag
cgcaagtga

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