KEGG   Halobiforma lacisalsi: CHINAEXTREME20010
Entry
CHINAEXTREME20010 CDS       T04669                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hlc  Halobiforma lacisalsi
Pathway
hlc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CHINAEXTREME20010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlc03400]
    CHINAEXTREME20010
Enzymes [BR:hlc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CHINAEXTREME20010
DNA repair and recombination proteins [BR:hlc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CHINAEXTREME20010
 Prokaryotic type
     CHINAEXTREME20010
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH DUF2400 5_3_exonuc
Other DBs
NCBI-ProteinID: APW99914
UniProt: M0LU22
Position
4104400..4105083
AA seq 227 aa
MGTPRETRAEQAEEVIERLEAEYPDSTISLRYSNRLELLIAVILSAQCTDERVNRETEHL
FEKYDGPADYVEVPQDELAADLDSITYYNNKAGYIQSACEAILEDHGGEVPDTMDELTEL
SGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTEEKRPEAIEQELMGIVPEGYWQ
QFTHLCIDHGRAICTARNPDCSGCVLADICPSEKGDSDVDLASGEPW
NT seq 684 nt   +upstreamnt  +downstreamnt
atgggaacgccacgcgagacgcgcgcggagcaggccgaggaagtcatcgagcgactcgag
gcggagtatcccgactcgacgatctcgctgcggtactcgaaccggctcgagttgctgatc
gcggtgattctctcggcccagtgtacggacgagcgcgtaaaccgggaaaccgagcacctg
ttcgagaagtacgacggcccggcggactacgtcgaggttccccaggacgaactcgcggcg
gacctggactcgatcacctactacaacaacaaggcgggctacatccagagcgcctgcgag
gcgatcctcgaggatcacggcggcgaggtcccggatacgatggacgagttgaccgagctg
tcgggcgtcggtcgcaagacggccaacgtcgtcctccagcacggccacgacgtcgtcgag
gggatcgtcgttgacacgcacgtccagcggctctcgcgtcggctcgggctcacggaggag
aagcgacccgaggcgatcgaacaggagttgatggggatcgttccggagggctactggcag
cagttcacccacctctgtatcgaccacggccgcgcgatctgtacggcgcggaacccggac
tgtagcggctgcgttctcgccgatatctgtccctcggagaagggagacagcgacgtcgat
ctggcttctggcgaaccctggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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