KEGG   Halostagnicola larsenii: HALLA_14205
Entry
HALLA_14205       CDS       T03008                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hlr  Halostagnicola larsenii
Pathway
hlr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hlr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HALLA_14205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlr03400]
    HALLA_14205
DNA repair and recombination proteins [BR:hlr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HALLA_14205
SSDB
Motif
Pfam: MutS_V HHH_5 AAA_21 AAA_28 NTPase_P4 AAA_14 AAA_29 AAA_23
Other DBs
NCBI-ProteinID: AHF99764
UniProt: W0JRF6
Position
complement(1750643..1752427)
AA seq 594 aa
MRLEEYWGVGPKTRETLVAELGRERAIRAIESGDVRTLSEAGLPRGRATRILRRATGGAG
MDVLATSDARKAYKELLDLAVEHAVTERAADRIRVLTPRTSRDEMIDRLDGVLAARDAWT
TLEDEDKERVLEAYDRYDERDESEHAAVEAALTLLEAGVDSGPFAAIAELERETLTEAAD
ALGALTGGRVREGADDELDRLRTALGAVEDMDANALELIEELRDDGIHDVEGFRDAFEDR
LLSETGVTVDQVRDAMPTDASDATDFVGGTLRALRSNLTEAVDERETAVAAEFEETLEAA
DDAVEQAVSAVDEIALHLSLARFAIAYDCTRPTFVGDESARSDRDAISVVNARNLSLEAR
EDESVQPVTYGLGAHGVTSVPEDVGSVPGEEDVAVLTGANSGGKTTLLETLCQVVLLASM
GLPVPADRAEVTPVDSLVFHRRHASFNAGVLESTLKSIVPPLSSGGRTLMLVDEFEAITE
PGSAADLLHGLVTLSVDRDAMGVFVTHLADDLEPLPEAARVDGIFAEGLDPDLELLVDYQ
PRFNTVGRSTPEFIVSRLVANATDRTERTGFETLAEAVGDEIVQRTLADARWNE
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcgactcgaggagtactggggagtcgggccgaagacccgcgagacgttggtcgcggaa
ctcggtagggaacgagcgatcagagcgatcgagagcggcgacgttcggacgctctcggag
gcggggttaccccgaggtcgggcgacccgcattctccgacgggcgaccggcggcgcggga
atggacgtgttggcgaccagcgacgcccgcaaggcctacaaggaactgctcgatctggcg
gtcgaacacgcggtcaccgagcgggcagccgatcggatcagagtgctcacgccccggacg
agccgggatgagatgatcgaccggcttgacggcgtgctggctgctcgggacgcctggacg
accctcgaggacgaagacaaagaacgcgtgctcgaggcctacgaccgctacgacgagcga
gacgagagcgaacacgcggccgtcgaagcggcgcttacgttactcgaggcgggggtcgat
tccgggccgttcgcggcgatcgccgaactcgagcgcgaaacgttaacggaggccgccgac
gcgctcggcgcgttgacgggcggtcgagttcgcgagggggccgacgacgaactcgatcga
cttcggaccgcactcggcgcggtcgaggacatggacgcgaacgcgctcgaactcatcgag
gagcttcgggacgacggcatccacgacgtcgaggggttccgcgacgcgttcgaggaccgc
ctgctgagcgagacgggcgtcacggtcgatcaggttcgagacgcgatgccaaccgacgcc
agcgacgccaccgacttcgtcggcggcacgctccgggcgcttcgatcgaacctcaccgag
gccgtcgacgagcgcgagacggccgtcgcggcggaattcgaggaaacgctcgaggctgcg
gacgatgccgtcgaacaggcggtttctgcagtcgacgagattgccttacacctctcgctc
gcgcggttcgcgatcgcctacgattgtacgcgaccgacgttcgtcggggacgagagcgct
cggagcgaccgcgacgcgatttcggtcgtcaacgcccgcaatttgtcgctcgaggcgcgg
gaagacgaatccgtccagccggtcacgtacggtctcggcgctcacggcgtgacgagcgtc
cccgaagacgtcggctccgtccccggtgaggaagacgtggccgtcctcacgggggcaaac
agcggcgggaagacgacgctgctcgagacgctctgtcaggtcgtgttgctggcgtcgatg
ggattacccgttccggccgatcgggccgaagtgacccccgtcgattcgctggtctttcac
cgacgccacgcgagtttcaacgccggcgtgctcgagtcgacgctgaagtcgatcgtgccg
ccgttgtcctccggcggtcgaacgctgatgctcgtcgacgagttcgaagccatcaccgag
cccggaagcgcggccgatctgttgcacgggctcgtgacgctctcggtcgacagggacgcg
atgggcgtgttcgtcacacacctcgcggacgacctcgagccgctgcccgaggcggcgcgc
gtcgacggcatcttcgccgaggggctcgatcccgacctcgagttgctcgtcgattaccag
ccccggtttaacaccgtggggcgctcgacgccggagttcatcgtctcgaggctggtcgcg
aacgcgacggaccgaaccgaacggacgggctttgagacgctcgcggaagccgtcggcgac
gaaatcgtccagcggacgctcgcggacgcgcgctggaacgagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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