KEGG   Haloarcula marismortui: rrnAC3173
Entry
rrnAC3173         CDS       T00211                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
hma  Haloarcula marismortui
Pathway
hma00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hma00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    rrnAC3173 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hma01007]
    rrnAC3173 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hma03016]
    rrnAC3173 (lysS)
Enzymes [BR:hma01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     rrnAC3173 (lysS)
Amino acid related enzymes [BR:hma01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   rrnAC3173 (lysS)
Transfer RNA biogenesis [BR:hma03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    rrnAC3173 (lysS)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1e Glyco_trans_4_4
Other DBs
NCBI-ProteinID: AAV47879
UniProt: Q5UXX4
Position
I:complement(2805718..2807355)
AA seq 545 aa
MAEDPYEVGRGVSRAFWADSVADAIEARDPDEPIVIKGGVSPSGVPHIGHFNEIMRGYYV
AEALRDRGHEVRQVFTADDKDRLRAVPRQLADLDWNVVGLGEVDAGALGRNLGKPYTDIP
DPFGCCDSYGAHFTALLQKSAELVGVDVEFVSNTELYADGEFEAVTRRVLERADRARDVL
AEYQNKVDDDYVPFLPQCAECGKITEGVTAVDLDAGEVEYVCEDVEAGDQTIDGCGHEGT
ATLRDGKLPWRFEWPAQWEILGVDFEPFGKDHAEGSWPSGEDVAENVLDIQPPVPMVYEW
FTLDGEPLSSSSGNVITVDEVLDILEPEVFKYFFVKDPRKQRDFSVENIDQLVDEFDRFE
RRYFEEIEASEDDAELAERAYPMVVDDPREQRIRIPYTFAAVLGMTDDPALREQIARKEG
HIPDDAPEWAVEQALARVERAQEWASLTNNEFNYELKRAEIPEVSFDDATAAALDELADF
IAEGHDGEAIQSEIYETAKRNDIDISEFFSAGYRLLFDDTEGPQLGTFIAKLDREFVVER
FRRNE
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcggaagacccctacgaggtcggccgcggcgtttcccgggcgttctgggccgactcc
gtcgccgacgccatcgaggcacgagaccccgacgaaccaatcgtcatcaagggcggcgtc
tcgccatccggcgtcccccacatcggccacttcaacgagattatgcggggctactacgtc
gccgaggccctgcgggaccgcggtcacgaggtccgacaggtgttcactgccgacgacaaa
gaccggctccgggcggtcccccgccagctcgccgacctcgactggaacgtcgtcggcctc
ggggaagtcgacgccggcgcactcgggcggaacctcgggaagccgtacacggatattccg
gacccattcggctgctgtgattcctacggcgcccacttcacggcgctcctgcagaaaagc
gccgagctggtcggcgtcgacgtggagttcgtctcgaacaccgagctgtacgccgacggc
gagttcgaagcagtcacgcgccgggtgctcgaacgcgccgaccgggcccgtgacgtgctc
gcggagtatcagaacaaggtcgacgacgactacgtcccgttcctgccccagtgtgccgag
tgtgggaagattactgagggcgtcaccgcggtcgacctcgacgccggcgaagtcgaatac
gtctgtgaagacgtcgaggccggcgaccagaccattgatggctgtggccacgaaggcacg
gcgacgctccgggacggaaagctcccgtggcggttcgagtggcccgctcagtgggagatc
ctgggcgtcgacttcgagcccttcggcaaggaccacgccgagggctcctggccatcaggt
gaggatgtcgctgagaacgtgctggacatccagccgccggtcccgatggtgtacgagtgg
ttcaccctcgacggcgaaccgctctcctcttcctccggcaacgtcatcaccgtcgacgaa
gtgctggacatcctcgaaccggaggtattcaagtacttctttgtgaaggacccgcggaaa
cagcgggacttctccgtcgagaatatcgaccagctcgtcgacgagttcgaccggttcgaa
cggcgatatttcgaagaaatcgaggccagcgaggacgacgccgaacttgcggagcgagcc
tatccgatggtcgtggacgacccacgcgaacagcggatacggattccctacacatttgcg
gccgtgctcgggatgaccgacgacccggcgctccgggagcagatcgcccggaaagaaggc
catatcccggacgatgcgccggagtgggccgtcgagcaggcgcttgcccgcgtcgagcga
gcccaagagtgggccagcctgacgaacaacgaattcaactacgaactcaagcgcgccgag
atacccgaggtctcattcgacgacgcaacggcggccgcactggatgaactggccgatttc
atcgccgaaggccacgacggcgaggcaatccagtcggaaatctacgagacggcaaagcga
aacgacatcgacatcagcgagttcttctcggccggctaccggctgctgttcgacgacacc
gaaggcccacagctcgggacgttcatcgcgaaacttgaccgggagttcgtcgtggagcgt
ttccgtcgcaacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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