KEGG   Hyphomicrobium sp. MC1: HYPMC_4624
Entry
HYPMC_4624        CDS       T01557                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme, putative 2-methylthioadenine synthetase
  KO
K18707  threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
Organism
hmc  Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:hmc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hmc03016]
    HYPMC_4624
Enzymes [BR:hmc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     HYPMC_4624
Transfer RNA biogenesis [BR:hmc03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    HYPMC_4624
SSDB
Motif
Pfam: Radical_SAM UPF0004 B12-binding PsiA
Other DBs
NCBI-ProteinID: CCB67832
UniProt: F8JE10
Position
4449986..4451248
AA seq 420 aa
MSEPQVITLGCRLNTYESEVMRRHAREAGLDNAIIVNTCAVTGEAVRQAAQTVRRLRREK
PNARIIVTGCAAQIEPERFADMPEVDHVVGNAEKMQAETFAGLSIADGERVQVNDIMSVR
DTALHMIDGFGSRTRAYVQIQNGCDHRCTFCIIPFGRGPSRSVAAGEVVTQVRRLVEKGY
AEIVLTGVDITSYGRDLPGSATLGKLVRQVLKHVPELARLRLSSIDQVEADDDLMIALRD
EERLMPHLHLSLQAGDDLTLKRMKRRHLRSDAIAFCEKARALRPDIVFGADLIAGFPTET
DQMFENSYRIVDECGLTYLHVFPFSARRGTPAARMPQVNSTIIKERAARLREKGTNVLAS
YLQSQRGRVVDVLVESDGKGRTPQFAEVLLHGEAPFGAGAVIRTEIKGADAQHLIGEACA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtccgaacctcaggtgatcacgctcggctgccggctcaacacgtatgagtccgaagtg
atgcgccgtcacgcgcgcgaggcaggtctcgataacgcgattatcgtcaatacgtgcgcg
gtgacgggcgaagcggtgcgtcaggcggcgcaaacggttcgcaggctgcggcgtgagaag
cccaatgcgcggatcatcgtgacgggatgcgcggcgcaaatcgagcctgaacgtttcgcc
gacatgccagaagtcgatcatgttgtcggcaacgccgagaagatgcaggcagagacgttc
gccgggctgtcgattgcggacggcgaacgcgtgcaggtcaacgacatcatgagcgtgcgt
gatacggcgctgcacatgatcgatggtttcggttcgcgcacgcgggcctatgtgcaaatt
cagaacggctgcgatcatcgctgcacgttctgcatcatccctttcggccgtgggccgtcg
cgatcggtcgcggcgggcgaagtcgtgacgcaggtgcgcaggcttgtcgagaagggctac
gccgagatcgtgctgaccggcgtcgacatcacgtcatacggccgcgatctgccgggttct
gcgacgctcggcaaactcgttcggcaggtgctgaagcatgtgccggagttggcgcgcttg
cggctgtcgtcgatcgatcaggtcgaagccgacgacgatctgatgatcgcattacgcgat
gaggaacgtctgatgccgcatctgcatttgtctttgcaggcaggcgatgatctgacgttg
aagcgcatgaagcgacggcatttgcggtctgatgcaattgcgttttgcgaaaaggcgcgc
gccctgcgtcccgatatcgtgttcggggccgatctgattgcaggctttccgacggaaacc
gatcagatgttcgagaattcctatcgtatcgtcgatgagtgcggtctgacgtatctgcac
gtctttccgttctcggcgcggcgcggcacgccggccgcccgcatgccgcaagtcaacagc
accatcatcaaggagcgcgcggcaaggctgcgtgaaaaaggaacaaacgtgctcgcttcg
tatcttcaatcgcaacgcggccgtgtcgtcgatgtgctcgtcgaaagtgacggcaaggga
cgcacgccgcaattcgccgaagtgctgcttcacggagaggcgccgtttggcgctggggcg
gtcattcggacggaaatcaagggcgccgatgcgcaacatctgatcggcgaggcgtgcgcg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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