KEGG   Haloferax mediterranei: HFX_0646
Entry
HFX_0646          CDS       T02129                                 
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hme  Haloferax mediterranei
Pathway
hme00970  Aminoacyl-tRNA biosynthesis
hme01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hme00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HFX_0646 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hme03029]
    HFX_0646 (gatB)
Enzymes [BR:hme01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HFX_0646 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HFX_0646 (gatB)
Mitochondrial biogenesis [BR:hme03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HFX_0646 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
NCBI-ProteinID: AFK18370
UniProt: I3R2B0
Position
complement(610845..612335)
AA seq 496 aa
MTAQALEQRELAVVIGLEVHVQLETTTKIFCSCSTEPAEDEEPNTRVCPVCLGLPGALPV
LNEKAVESAVKIGKALNADIAEDTRFHRKNYYYPDLPKNFQITQYDAPICADGTLEVAVE
GNRRDIGITRAHLEEDPGSLQHKGGSIDTADYTLVNYNRAGTPLVEIVTEPDFRSPQETR
AFLAKLEEVLEYLGVFDATRDGSLRIDANISLVPADEVNGDGSISDEALEAANRTEVKNI
SSHKGAEKALAYEVTRQKNAIKRGRAVEQETRHWDESRGITVSMRSKEEEKDYRYFREAD
LPPLQVAHWKAEIPIPELPDARRERFQTEYGIDEESASKLTSTKEVADFFEDVAAEFDAD
LAATWVADNLLGELNYRDMLITDVADRLDEFTRLVELVDADEVTTKNAEEIVLRKMLDEG
KDPDTIVEEEGLGKADDDEIGGFVTEAIEENPDAVSDYHDGEGGALNFLVGQVMQKSQGS
ADPGTVNQLLREQLDE
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgactgcgcaagcgctcgaacagcgcgaactcgcggtcgtcatcgggttggaggttcac
gttcaactcgaaacgaccacgaagattttctgtagctgttcgactgagcctgccgaggac
gaggagccgaacacccgcgtgtgcccggtctgtctcgggctaccgggcgcgctcccggta
ctcaacgagaaggctgtcgaatcggcggtcaaaatcgggaaggccctgaacgccgatatc
gccgaggacacccggttccaccggaagaactactactaccccgacctcccgaagaacttc
cagatcacccagtacgacgcgcctatctgtgccgacgggacgctggaagtcgccgtcgag
gggaaccgccgcgacatcggcatcacgcgcgcccacctcgaggaggacccgggtagcctc
caacacaaaggtggcagcatcgacaccgcggactacacgctcgtcaactacaaccgcgcg
gggacaccgctcgtcgaaatcgtcaccgaaccggacttccgcagcccgcaggagacgcgc
gcgttcctcgccaaactcgaagaagtgctcgaatatctgggcgtcttcgatgcgacccgt
gacgggtcgctccgcatcgacgccaacatctcactcgtccccgccgacgaggtcaacggc
gacggctctatctccgacgaggcactcgaagcggcgaaccgcaccgaggtcaagaacatc
tccagccacaaaggtgcagaaaaggcgctggcctacgaggtcacccgccagaagaacgcc
atcaagcgcggccgcgccgtcgaacaggagacgcggcactgggacgaatcccgcggcatc
accgtctcgatgcgctcgaaggaagaagaaaaagactaccgctacttccgcgaggccgac
ctcccgccgctccaagttgcccactggaaagcagagattccgattccggaacttcccgac
gcccgccgcgagcgcttccagaccgagtacggcatcgacgaggagtccgcgtcgaagctc
acgtcgaccaaggaagtcgcggacttcttcgaagacgtcgccgccgagttcgacgccgac
ctcgccgcgacgtgggtcgccgacaacttgctcggcgaactcaactaccgcgacatgctc
atcacggacgtggcggaccgcctcgacgagttcacgcgcctcgtcgaactcgtcgacgcc
gacgaggtgacgacgaagaacgcagaagaaatcgtcctccggaagatgctcgacgagggg
aaagacccggataccatcgtcgaggaagaaggactcggcaaggccgacgacgacgagatc
ggcggcttcgtcaccgaagcaatcgaggagaaccccgacgctgtctccgactaccacgac
ggcgaaggcggcgcgctgaacttcctcgtcggacaggtcatgcagaagtcccaggggagc
gccgaccccggaaccgtaaaccagctgctccgcgagcaactcgacgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system