KEGG   Haloferax mediterranei: HFX_0747Help
Entry
HFX_0747          CDS       T02129                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
hme  Haloferax mediterranei
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:hme00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HFX_0747 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HFX_0747 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HFX_0747 (trpB)
Enzymes [BR:hme01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HFX_0747 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
703121..704395
Genome map
AA seq 424 aa AA seqDB search
MSVDGKFGDYGGQYVPEALMPAIEELNDAYERYVLNNEDGFMDDFRARLRDFGGRPTPLQ
RAGRLSKRYGREVYLKREDLVHGGAHKLNNALGQVLLAKYMGKERIIAETGAGQHGTATA
MACAHLDIPCEIYMGKRDINRQRPNVFRMKLNGSEVNPVTVGRGTLKEAISETMRDWATN
VEDTHYVIGSVVGPHPFPSMVRDFQAVISEEARTQAHEQMGRLPDAVIACAGGGSNTMGA
FAEFVEDDETSLYAVEAGGSTLEVDEEAGVAPNSASLTTGSEGILHGARTLLLQDRDGQI
MESHSVSSGLDYAGVGPELAHLVDTGRVTAVNVDDDEALTAFHRLSQLEGIIPALETAHA
FGYLEQVAGPDAPADSDEEADDLGEFVVVNVSGRGDKDLESAIEETYERDIDIAPNMDEF
TGGL
NT seq 1275 nt NT seq  +upstreamnt  +downstreamnt
atgagtgtagacggcaaattcggcgactacggcggacagtacgttcccgaggccttgatg
ccggccatcgaggaactgaacgatgcgtacgagcggtacgtcctgaacaacgaagacggc
ttcatggacgacttccgcgcacgattgcgggacttcggcggacgaccgacgcctctccag
cgcgccggccgtctctcgaagcggtacggccgcgaggtctacctcaagcgagaagacctc
gtccacggcggcgcacacaaactcaacaacgccctcgggcaggtcttgctcgcgaagtac
atgggcaaggaacgaatcatcgcggagacgggcgcgggccagcatggtactgccacggcg
atggcttgcgcgcacctcgacatcccctgcgaaatctacatgggcaaacgcgacatcaac
cgacagcgacccaacgtcttccggatgaaactcaacggctcggaagtcaacccggttacc
gtcggtcgcggcacgctcaaggaggccatctccgagacgatgcgcgactgggcgaccaac
gtcgaagacacgcactacgtcatcggctccgtggtcggcccgcaccccttcccgagcatg
gttcgggacttccaggcggtcatctccgaggaagcgcggacgcaagcccacgagcagatg
ggacgactccccgacgccgtcatcgcgtgcgctggcggcgggtcgaacacgatgggcgcg
ttcgccgagttcgtggaggatgatgaaaccagcctctacgccgtcgaagccggcggttcg
acgctcgaagtcgacgaagaagcgggtgtcgcccctaattcggcctcgctcacgaccggc
agcgaaggaatcctccacggcgctcgaaccctcctcttgcaggaccgcgacggccagatt
atggagtcgcattcggtctcgtcgggtctcgactatgccggtgtcggcccggaactcgca
cacctcgtcgataccggtcgcgtcaccgccgtcaacgtcgacgacgatgaagccctgacc
gcattccaccgtctctcccagttggagggcatcattcccgcgttggagacggcccacgcc
ttcggttacctcgaacaggtcgcaggtcccgatgctcccgcagacagcgacgaagaggcc
gacgacctcggcgagttcgtcgtcgtcaacgtctccggccgcggcgacaaggacctcgaa
tcggccatcgaggagacctacgagcgcgacatcgatatcgcgccgaacatggacgagttc
acggggggactgtaa

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