KEGG   Hydra vulgaris (swiftwater hydra): 100203423
Entry
100203423         CDS       T01080                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013  Nucleocytoplasmic transport
hmg03015  mRNA surveillance pathway
hmg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100203423
  09122 Translation
   03013 Nucleocytoplasmic transport
    100203423
   03015 mRNA surveillance pathway
    100203423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmg03019]
    100203423
   03041 Spliceosome [BR:hmg03041]
    100203423
Messenger RNA biogenesis [BR:hmg03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     100203423
Spliceosome [BR:hmg03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    100203423
SSDB
Motif
Pfam: RRM_1 DUF3602
Other DBs
NCBI-GeneID: 100203423
NCBI-ProteinID: XP_012564932
UniProt: A0A8B6XLL8
Position
9:40264632..40269390
AA seq 160 aa
MAAGLSAYRDQHFKGTRADLEKKLETSTTLYVGNLSFYTSEEQIYELFSKSGDIKRIIMG
LDRIKKTPCGFCFVEYYFREGAENAIRYINGTRLEDRIVRSDWDAGFEEGRQYGRGRSGG
QVRDEYRNDYDPGRGGYGKLAQERNRADDSFDAESYSDMK
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcagctggacttagtgcttatagagatcaacactttaaaggaacgcgcgcagattta
gaaaaaaaattagaaacaagtacaactttatatgtcggtaatctttcgttttatacatca
gaagaacaaatttatgaactattctctaaaagcggcgacatcaaacgcataattatggga
ctagatagaattaaaaagacaccttgtggattttgttttgtagaatattatttccgtgaa
ggtgctgaaaatgctatcagatatattaatggaacaagattagaagatcggattgttcga
agtgattgggatgcaggatttgaagaaggtcgtcaatatggtcgaggcagaagtgggggg
caagtgagagatgaatacagaaatgactatgatcctggtagaggaggatacggtaagctt
gcacaggaacgtaaccgagcagatgatagctttgatgcggaaagttacagtgatatgaaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (58)   

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