KEGG   Hydra vulgaris (swiftwater hydra): 100207129
Entry
100207129         CDS       T01080                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hmg04121]
    100207129
   03036 Chromosome and associated proteins [BR:hmg03036]
    100207129
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hmg03037]
    100207129
Enzymes [BR:hmg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100207129
Ubiquitin system [BR:hmg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100207129
  UBL E3 ligases
   100207129
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100207129
Cilium and associated proteins [BR:hmg03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   100207129
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-rbx1 PWI zf-RING_UBOX Baculo_IE-1 zf-RING_10 zf-ANAPC11
Other DBs
NCBI-GeneID: 100207129
NCBI-ProteinID: XP_012554996
UniProt: A0A8B7DB58
Position
13:4876497..4919999
AA seq 1275 aa
MTSNFLNSDEEAVLRLRIDALKSASRKAFHRIEQSISSEMENESENELREMALKSISKDS
SKIRAKKTEASNIERKEPIKHSNDDLKLRQVALKSLLQKRLLKTEDLLKKANNKVMQQNV
QNKDESITPIKPSTKITDLKSKKIEDHKSVTKITKPKSSSKIIKTIKTRDKTVDKSLTQS
IQNTAECIVKQSKIESDQNGDDSMRDTFVRELSISKILVSQNEDDQISLCVSDNDDKELC
LSDNDDKVSCVSDHEGELLKNNTDLCKVKMTITDSKSNFDDLQSLEKSNDLFQLPIDCTP
LLSVVEHSFGSIDNNDIDFHNNNTTSKNNFSEDSKLCSEQSEILENQESRCITDLNSVKG
CDDISAEDKDLNMCENHAIDSNKTSSLVSNFCLDNNEPGPSGYKKSNDVVYDSDAEHSII
EITPPAKKTHLVIELSSDSDSSFVDKTSSLGNKALIKNKRRSKQKVIQEELSRQTTKSPG
REDMKDSICSVCLGPFENRSFLLECFHSFCHICIIQWSELSRTCPLCKTKYKSLIHSVNS
DLEYQQYTFPEESKLSDQVQTQRVQNGNDGRRFRYQTTLVDSHAWARRRAERERVENTLS
QGREQRKMSRRLKWSATKDRRKAVYRLHMHVKEVKQRGRPKLRDISCEFFKENPALKHRL
VPWLLRDLNVLLGDNDENIRFVMSLILNLISNISMECEEFKKQLEPFLFKETDHFIAELI
SFARSPYDIKGYDDNVVYDVSIHNPVHVIEDSLQERLLNDILDGNDDDDSRNIVTSIDVG
SNSTDSPIVQNIDTSPEVEVSPEVECSQEEVEEKLEEHDTDISRNKKKKKKKKRRKHKKR
SKENITESVSCVDNDDIDTERVIDGGNEEAVNDFGDKDISSGHQVTNNVRDNLSNDIREI
IDDGDNLSNDIREIVIDDGEIKEHLDDQNQKHKKYKKKHSKHRHKKRHRKHFDDELLETR
KHKRKRLDNEDAESLTHIHKKKKKEDNHHSSHDSKHKKKKKSNHHSRKRKHDNRDDCDIG
NEKCLDLGNSNIISCPDKTLINEDILIGDESTKTHSKKKKTEHKLERTHKTERKSDRTHK
KKAKKHKSKKKRKRNHSNNLNSNSHHDLTHVIDLRETEKKIESLFASISKRYNLPLMIPS
EEKIYDKTLLENESSKNTDFETMDKNAREVRDFIHNLNPQNNAYESRVDIVRELLRVEKA
LIKKKDRKERCPKTKIKQVAADSTVYDLPETLTYEPKKQFQNDKTYIALMSELQEIEGRL
SSCRSSFLKNNEKIV
NT seq 3828 nt   +upstreamnt  +downstreamnt
atgacaagcaattttttaaattcagatgaagaagctgttttaaggcttcgtattgatgct
ttaaaatctgcatctaggaaagcttttcatagaattgaacaaagtataagtagtgaaatg
gaaaatgaaagtgagaatgaacttcgtgaaatggcactaaaaagtatatcaaaagattcg
tcaaaaattcgtgctaaaaaaactgaagcttctaatattgagcgtaaagaaccaattaaa
catagcaatgatgatttaaagcttcggcaagttgcattaaagtcattactacaaaagaga
ttgttgaaaactgaagatttgcttaaaaaagcaaacaacaaggttatgcaacaaaatgtt
caaaacaaagatgaaagtataactccaataaaaccttcaacaaagatcacagatcttaag
tctaaaaagattgaagatcacaaatctgttacaaaaataacgaaaccaaaatcttcttca
aagatcataaagacaatcaagaccagagataaaactgttgataaatcactgacacagagt
attcaaaatactgctgagtgtattgtgaaacaaagtaagattgaatcagatcagaatgga
gatgatagtatgagagatacttttgttagagaattaagtatcagcaaaatattagtatca
caaaatgaagatgaccaaatttctctatgtgtatcagataacgatgacaaggaattgtgc
ttatcagataatgatgataaggtgtcatgtgtttcagatcatgagggtgaactgttaaaa
aataacacagatttatgtaaggtaaaaatgactattacagattccaaatccaatttcgat
gatcttcaatcgctagaaaaatctaatgatttgtttcaacttcctattgactgtactcct
ttgctaagtgtagtagaacattcttttggctcaattgacaacaacgatatagattttcat
aataataataccacttcaaaaaataatttttcagaggatagtaaattatgttcagagcaa
agtgaaattttagagaatcaagaatcaagatgcatcactgatttgaattctgttaaagga
tgtgatgatatatctgcagaagataaagatttaaacatgtgtgaaaatcatgcaattgat
tcaaataaaacaagttccttagtttctaatttttgtttggacaataatgaaccaggtcca
agcggttacaagaagtccaatgatgtggtatatgactcagatgctgaacattctattata
gaaataactccccctgctaaaaaaacccacttagttattgagttatctagtgactctgac
agttcttttgtggacaagacaagttctcttgggaacaaagcacttattaaaaacaaaaga
aggtcaaagcaaaaagttatacaagaagaacttagtcgtcaaacaacaaagtcgccagga
agagaagatatgaaggacagcatatgttcagtttgtcttggtccatttgaaaatcgatca
tttctgcttgagtgctttcattcattttgtcatatttgcattatacagtggtcagaatta
tctcgtacatgcccgctatgtaagactaagtataaatcacttatccactctgttaatagt
gatttggaatatcaacagtatacttttcctgaagaatcaaagttgagtgatcaagtgcaa
acgcagcgagttcaaaatggaaatgatggaagaaggtttcgctaccaaaccacacttgtt
gattctcatgcatgggcacgtagaagagctgagcgtgaaagagttgaaaatactctttca
caaggtcgtgagcaacgaaagatgtcaagaagattaaagtggtctgctacaaaagacaga
agaaaggcagtttatcgtttacatatgcatgtcaaagaagttaaacaaagagggcgacca
aaactgagggatatcagttgtgaattttttaaagaaaaccccgcactgaaacatcgattg
gtaccatggcttttgagggatttaaatgttcttcttggtgataatgatgaaaatatcaga
tttgtaatgagcttgattttgaatcttatatccaacatttctatggaatgtgaagaattt
aaaaagcagcttgagccgtttctttttaaggaaaccgaccattttattgcagagcttata
agttttgctcgctcaccttatgatattaaaggttatgatgacaatgttgtttatgatgtc
tcaatacacaatccagttcatgtaattgaagattctcttcaagagcgtttgttaaatgat
attttggatggaaatgatgacgatgattcaaggaatattgtcactagcattgatgttggt
tcaaattcaacagactcgccaatagtacaaaacattgacacttcaccggaagttgaggtg
tcacctgaagtggaatgttcacaggaagaagttgaggaaaagctagaagaacatgataca
gatatttcccgcaataaaaagaagaaaaagaaaaaaaagagaagaaagcataaaaaaagg
tctaaagaaaatattacagaatcagttagttgtgttgataatgatgacattgataccgaa
agagttattgatggtggtaacgaggaggctgtgaacgatttcggcgacaaggatattagt
agtggccatcaggttactaacaatgtccgtgacaatctcagtaatgatattcgtgagatt
atcgatgatggtgacaatctcagtaatgatattcgtgagattgttatcgatgatggtgag
atcaaagaacatttagacgatcaaaatcaaaaacataaaaaatacaaaaaaaagcactca
aaacatagacataagaagagacatcgaaaacattttgacgatgaacttttagaaacccgt
aaacacaaaagaaaacgtctggacaacgaagatgcagaatcattaacacatatccacaaa
aagaaaaaaaaagaagataatcatcatagttctcatgacagtaaacataaaaaaaaaaaa
aaatctaatcaccattcccgaaaacgtaaacatgacaatcgtgacgattgtgatatcggt
aatgagaaatgtctggatttaggaaactctaatataatatcttgcccggataaaacattg
ataaatgaagatattttaattggtgatgaaagtactaaaacccattcaaaaaaaaagaaa
acggaacacaagttagagcgaactcataaaaccgaacgtaaatcagatcgaactcataaa
aagaaggctaaaaaacacaaatcaaagaaaaaaagaaaacgaaatcattcgaacaatttg
aatagcaattctcatcatgatttaacacacgtgatagatttacgagaaactgaaaagaaa
atagaatcgctgtttgcaagtatttcgaagcgatataatcttcctttgatgataccttca
gaagaaaaaatttacgacaaaactttgcttgaaaatgaaagttcaaagaacacagacttt
gaaactatggataaaaatgcacgcgaagttcgggattttatccataacttaaatccccaa
aataacgcatacgaatcgcgtgtagatattgttcgggaattactgcgtgtggaaaaagca
cttattaaaaaaaaagatcgtaaagaacgatgtccaaaaactaaaataaagcaagtagct
gctgatagcactgtttatgatttgccagaaacattgacgtacgaaccaaaaaaacaattt
caaaacgacaaaacttatatagcattaatgagcgaactacaagaaattgagggacggtta
agttcatgtcgaagttcctttctaaagaataatgaaaaaattgtttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (117)   
   KEGG ORTHOLOGY (1)   
   RefGene (113)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (144)   

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