KEGG   Heliomicrobium modesticaldum: HM1_1748
Entry
HM1_1748          CDS       T00653                                 
Symbol
polA
Name
(GenBank) DNA polymerase i
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hmo  Heliomicrobium modesticaldum
Pathway
hmo03030  DNA replication
hmo03410  Base excision repair
hmo03420  Nucleotide excision repair
hmo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HM1_1748 (polA)
   03410 Base excision repair
    HM1_1748 (polA)
   03420 Nucleotide excision repair
    HM1_1748 (polA)
   03440 Homologous recombination
    HM1_1748 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmo03032]
    HM1_1748 (polA)
   03400 DNA repair and recombination proteins [BR:hmo03400]
    HM1_1748 (polA)
Enzymes [BR:hmo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HM1_1748 (polA)
DNA replication proteins [BR:hmo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HM1_1748 (polA)
DNA repair and recombination proteins [BR:hmo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HM1_1748 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HM1_1748 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_2 Taq-exonuc TERF2_RBM HHH_5
Other DBs
NCBI-ProteinID: ABZ84318
UniProt: B0TER6
Position
1752171..1754990
AA seq 939 aa
MRNAVFMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLD
KSRITHRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVC
LAKKQGIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDW
KGLMGDPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKGKLKEKLATHREQAFLS
RELATIQCNIPLEPDWEACRAASPDFPALRRLYKKLEFRSLLRHLPGDEGDDEAEGGSLF
ARQDEQAVSAVDPMGADGTAGGGVRCSAAEGDKPGDGQAVRPDQAVRIDVEAPLTVEYTA
VEDGNAIGAMLTELMQIGAEPGCRTAVLAAWEGSPRTGKLKQIVLAAGRDALLRLWVIDR
PGAFFAATKPFWASKDHRKLFFDAKSLWLLARREDTVIEGIDGDGLLGAYLLDPLANRYS
LARSAHDWIGWKVDTEAGRSVLPPEEGARAAAALFHMTPVMEARLGEEGLCALYRDVELP
LAPILGAMEWTGIKVNPAVLQEMAGELGADIRRLQADIYDLAGESFNINSTQQFGKILFE
KLGLPVIKRTKTGYSTDVEVLEELADRHPIVPKVLEYRQLMKLKSTYVEGLLPLIDGEDG
RIHTSFNQAVTATGRLSSTEPNLQNIPVRLEQGRRIRKAFTAPGDDWTLLAADYSQIELR
ILAHLSGDPSFKDAFAKNQDIHTRTASEVFGVPMENVTSEMRRRAKAVNFGIVYGISDFG
LSRDLGVLRAEARQYIDGYFDRYSGVKGYIDEIIAEARRQGYVTTLLGRRRRLPDLFVKN
KIRQNFGERAAMNTPIQGTAADIIKAAMVRIPGLLAAKGLKTRMLLQVHDELIFEAPKEE
LSEAAALIRETMEQTIRLDVPLTVDVKTGPNWYEMKPYL
NT seq 2820 nt   +upstreamnt  +downstreamnt
gtgcgcaatgctgttttcatggtgatcgacggcagcagcctgcttcatcgggctttttac
gcgctgcctcttatgtccacgtctcaaggcgttcacaccaacgccgtttacggatttttg
acaatgctggaacggctgcgccgggagtatcagccggattttcttgccgtctgcctggac
aaaagccgcatcacgcatcggacgcagcgatatgaagcctacaaggcccagcggggggcg
acgccggaggaactgcgcccccagttcggcctgctcaaagaggtcctcgccgcctggcgc
atcccgctttttgaagaggagggctatgaggcggacgacctcatcggggcactcgtctgc
ctggccaagaaacagggcatcgacagcctgatcgtcaccggcgaccgcgacgcctggcag
ttgatctcgcccggcgtggaggtgctcttcacccgtaaggggatcagcgagctcgaacgc
tatgatgaggaagcgctgaaagcgaagatcggtttgaccccccggcaggtcgtcgattgg
aaagggctcatgggggacccttcggacaatatccccggcgtgccgggggtgggggagaag
agggcttttaaactgctggagcagtttggcgacatggacagcctctacgagcggctcgat
gaggtgaaagggaaactgaaggagaagctggcgacccaccgcgaacaggctttcctttcg
agagaactggcgacgatccagtgcaatatccccctcgaaccggactgggaggcctgccgt
gcagcctcgcctgacttcccggcattgcgtcggctctataagaaattggagtttcggagt
ctcctgcgccatctccccggtgatgaaggcgatgacgaggccgaaggcggcagcctcttt
gcccgacaagatgagcaagccgtcagcgccgtcgatccgatgggcgctgacggaactgcc
ggtggtggcgtccggtgctctgccgcagagggtgacaaaccgggcgatgggcaggcggtc
agacctgatcaggcggttcgcatcgacgtcgaagcgcccctcacagtggaatacaccgcc
gtcgaagatggaaacgccatcggcgcaatgctgacggagctgatgcaaatcggcgctgag
cccggttgccggacggcggtgctggccgcctgggagggttcgccgcggaccggcaaattg
aagcaaatcgtcctcgccgcaggcagggacgccctgctgcgcctctgggtcatcgaccgg
cctggcgcgtttttcgccgccacaaagcccttttgggcatcgaaggaccaccgcaagctc
tttttcgacgccaagtcgctctggttgctggcccgccgggaggatacagtcatcgaaggc
atagatggcgacgggctgctcggcgcctacctgctcgacccgctcgccaaccgctacagc
ctggctcggtcggcccatgactggatcgggtggaaggttgataccgaggccggacggagc
gttcttccgccggaggaaggggctcgcgccgccgcagcgctctttcacatgaccccggtc
atggaggcgcgcctcggcgaagaggggttgtgtgccctctaccgggatgtggaactgccg
ctggcgccgatcctgggcgccatggagtggaccggcatcaaggtcaatcctgccgtcctt
caggagatggccggtgaactgggcgccgacatccgccgtctccaggctgacatttacgat
ctcgccggagagagctttaacatcaactcgacgcagcagtttggcaagatcctctttgaa
aagctcggcttgccggtgatcaaaagaacgaagaccggctattccaccgacgtggaggtt
ctcgaagagctggccgaccggcaccccatcgtgcctaaggtgctcgaataccgccagttg
atgaagctcaagtcgacctatgtggagggcctgctgcctctgatcgatggcgaagacggc
cgcatccacaccagctttaatcaggcggtgacggcgacggggcgtctctcgtcgacagaa
ccgaacctgcagaacataccggtccggctcgaacaggggcgccgcatccgcaaggccttt
acggcccccggcgatgactggaccctgctggccgccgattactcccagatcgaactgcgc
atcttagcccacctctccggcgatccctccttcaaggacgcctttgccaagaaccaggac
atccatacccgcacagccagcgaggtcttcggcgtgcccatggagaatgtgaccagcgag
atgcgccgtcgcgccaaggccgtcaacttcggcatcgtttacggcatcagcgacttcggt
ctcagccgcgatctgggggtgcttcgtgccgaagcgcgccagtacatcgacggctacttt
gaccgttacagcggcgtcaagggctatatcgacgagatcatcgccgaggcgcgccgccag
ggttatgtgacgaccctgctgggacgccggcgccggctgccggacctcttcgtcaagaac
aagatccgccagaacttcggcgagcgggcggccatgaacacgcccatccaggggactgcc
gctgacatcatcaaggcggccatggtgcgcatccccggcctgcttgcagccaagggactc
aagacccgcatgctcttgcaggtccatgacgaactgatctttgaggcgcctaaggaggaa
ctctccgaggccgccgcgctgatccgcgagacgatggaacagacgatccgccttgacgtg
ccgctcaccgttgacgtgaagacgggaccgaactggtatgagatgaaaccttatctataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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