KEGG   Halomicrobium mukohataei: Hmuk_2330
Entry
Hmuk_2330         CDS       T00982                                 
Name
(GenBank) Transcription factor TFIIE, alpha subunit
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
hmu  Halomicrobium mukohataei
Pathway
hmu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Hmuk_2330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hmu03021]
    Hmuk_2330
Transcription machinery [BR:hmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Hmuk_2330
 Prokaryotic type
  Archaeal type
    TFE
     Hmuk_2330
SSDB
Motif
Pfam: TFIIE_alpha zf_UBZ Sigma70_r3 Zn-ribbon_8 HypA RUBY_RBDX zinc-ribbons_6 DZR NRDD zinc_ribbon_4 CpXC
Other DBs
NCBI-ProteinID: ACV48442
UniProt: C7NXK8
Position
2246475..2247014
AA seq 179 aa
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFKYENIPEKLEEEMHRLLDALEDRESYERDNEFYLCE
RCGIRFEFDEAMEFGFQCPECGDQVESMENTRLVDAMDERIAKLRDELNVDHEREDAEA
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcttttgaggacctcctggaggatcctgtgatacagaaatacctccacgaactcgtc
ggaccgaaagggatgccggtcgccgccgcgccgccggacggcgaagtgaccgacgaagaa
ctcgccgaagagctgggactggagctcaacgacgtgcgtcgggcgctgttcattctctac
gagaacgacctggcgtcgtatcggcgactccgggacgaagactcggggtggctcacctac
ctctggacgttcaagtacgagaacatcccggagaagctcgaagaggagatgcaccgcctg
ctcgacgcgctcgaagaccgcgaatcgtacgagcgagacaacgagttttacctctgtgag
cgctgtggcatccgcttcgagttcgacgaggcgatggagtttggcttccagtgtcccgag
tgcggtgaccaggtcgaatcgatggagaacacgcgactcgtcgacgccatggacgaacgg
atcgcgaagctccgcgacgaactcaacgtcgaccacgaacgagaggacgccgaagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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