KEGG T00982: Hmuk

Halomicrobium mukohataei: Hmuk_2723

Entry

Hmuk_2723 CDS T00982

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

hmu Halomicrobium mukohataei

Pathway

hmu03030	DNA replication
hmu03410	Base excision repair
hmu03420	Nucleotide excision repair
hmu03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:hmu03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:hmu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:hmu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:hmu03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2610184..2611845

AA seq 553 aa
MEFAEFAATAAEIEGESADIATTELVAGLLADADEDLPILTRLVQGRVFPAYEATKLDIG
PKLCYEALARAAGRNVAVDDIEARVADVGEIGAVATELDLGGQQGLAAFGAGSQSPLTVA
EVADELAAIASASGSGSHDTKVETLFGLFNRASDAEARYLARIVLSEMRIGVGEGTVRDA
IAAAFDAPVDAVESALQVTNDYGNVARVARDEGADGLSDLELTIGRPVKAMLAQAGTVTE
ALEDWETAAVEWKYDGARVQVHDDGETVRLFSRNMEDVTDPLPEVVSAVEDAVDGPAILD
GEVVAVDGDGDPLPFQEVLRRFRRKHDVARASETVGVRLHAFDCLHADGRDLLDAPLVDR
RDALDAVLGDTDAVRSTFWLADDTERIEDIADEALAAGHEGIMLKDPDSTYSPGKRGKHW
RKRKPDVETLDLVVTGAQWGEGRRATYLGTFELSARTDDGYAPVGNVATGITDEQLATLT
ELLEPHVTRETGQRVEIEPAVVFEVGYEEIQRSSTYESGYALRFPRFVEIRSDKAVADGD
TLERVERLAARQG

NT seq 1662 nt +upstreamnt +downstreamnt
atggagttcgccgagttcgccgcgacggcggccgagatcgagggcgagagcgccgacatc
gcgacgaccgagctggtggccgggctgctcgcagacgccgacgaggacctcccgatcctc
acgcggctcgtgcagggacgggtgttcccggcctacgaggcgacgaagctcgacatcggc
ccgaagctgtgttacgaggccctggcgcgggcggcgggccgaaacgtcgccgtcgacgac
atcgaggcccgcgtcgcggacgtgggtgagatcggtgccgtcgcgaccgagctcgacctg
ggcggccagcagggacttgccgccttcggcgctggctcgcagtcgcccctgaccgtcgcc
gaagtggcggacgaactcgcggccatcgcgtcggccagcggttcggggagccacgacacg
aaagtcgagacgctgtttggcctgttcaaccgcgccagcgacgcggaggcccgctacctc
gcccggatcgtcctctcggagatgcggatcggcgtcggcgaggggacggtgcgcgacgcc
atcgcggcggccttcgacgcgccggtcgacgccgtcgagagcgcgctacaggtcaccaac
gactacgggaacgtcgcccgggtggcccgagacgagggggccgacgggctgtccgacctc
gaactgacgatcggacggccggtcaaggcgatgctcgcacaggccggcaccgtgaccgag
gccctcgaagactgggagaccgcagcggtcgagtggaagtacgacggcgcgcgggtccag
gtccacgacgacggcgagacggtccggctgttctctcggaacatggaggacgtgaccgat
ccgctgccggaggtggtgtcggccgtcgaggacgccgtcgacggtccggccatcctcgac
ggcgaggtcgtcgcggtcgacggcgacggcgatccgctccccttccaggaggtcctgcga
cgcttccggcgcaaacacgacgtggcccgtgccagcgagaccgtcggcgttcgcctgcac
gcgttcgactgcctccacgccgacggtcgcgacctgctggacgcccccctcgtcgaccga
cgggacgcgctcgacgcggtgcttggcgacaccgacgccgtccggtcgacgttctggctc
gcagacgacaccgaacggatcgaggacatcgccgacgaggcgctggccgccggccacgaa
gggatcatgctgaaagatcccgactcgacgtactcccctggcaagcggggcaaacactgg
cgcaagcgcaagcccgacgtggagaccctcgacctcgtcgtcaccggtgcacagtggggc
gagggacggcgagcgacctacctggggaccttcgagctgtcggcccggaccgacgacggc
tacgcgcccgtcggcaacgtcgcgaccgggatcaccgacgaacagctggcgacgctgacg
gaactgctggagccacacgtcacccgggagaccggccagcgcgtcgagatcgaaccggcc
gtcgtcttcgaggtcggctacgaggagatccagcgctcgtcgacctacgagtcggggtac
gcgctccggttcccgcggttcgtcgagatccgctcggacaaagccgtcgcggacggcgac
acgctcgaacgggtcgagcggctggccgcccggcaggggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-HMU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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