KEGG   Halomicrobium mukohataei: Hmuk_3075
Entry
Hmuk_3075         CDS       T00982                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hmu  Halomicrobium mukohataei
Pathway
hmu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hmuk_3075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmu03400]
    Hmuk_3075
Enzymes [BR:hmu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Hmuk_3075
DNA repair and recombination proteins [BR:hmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Hmuk_3075
 Prokaryotic type
     Hmuk_3075
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 DUF2400
Other DBs
NCBI-ProteinID: ACV49180
UniProt: C7P1U0
Position
complement(2957834..2958646)
AA seq 270 aa
MSDDAEPSVNISGGESGGGAAVEFEPADAETRAEAVVDRLGELYWTKAYGGRDAFECLVR
TILSQNTSDKASQPAHDALMERYGADGEDLAATLADADQQRLAETIQPAGLHNQKSETIV
RLAGRVCEEYGFGAEFDAFVRGGDPGDVRSALLDMKGVGPKTADCVLLFAGGRGGVFPVD
THVHRIARRMGLAPADADHEGVRAALEDDIPAEKCGFGHTAMIQFGREYCSARKPACLDD
PEACPLADQCEQLGVSPATGEVFDPAERAE
NT seq 813 nt   +upstreamnt  +downstreamnt
atgagcgacgacgccgagccctcggtcaacatcagcggcggcgagagcgggggcggcgcg
gcagtcgagttcgaaccggccgacgccgagacgcgggccgaagcagtcgtcgaccgactg
ggagagctctactggacgaaggcttacggcggccgagacgccttcgagtgtctcgtccgg
accatcctctcgcagaacacctccgacaaggccagccagcccgcccacgacgcgctgatg
gagcggtacggggccgacggggaggatctggccgcgacgctcgccgatgcggaccagcaa
cgcctcgccgagaccatccagccggcgggcctgcacaaccagaaatcggagacgatcgtt
cgactcgccgggcgcgtgtgcgaggagtacggcttcggggccgaattcgacgcgttcgtc
aggggcggcgacccgggcgacgtgcgctcggcgctgctggacatgaaaggggtcgggccg
aagaccgccgactgtgtgctcctgttcgccggcggtcgcggcggcgtcttccccgtcgac
acgcacgtccaccgcatcgcccgacggatggggcttgcacccgccgacgccgatcacgag
ggcgtccgtgcggccctcgaagatgatattcccgccgagaaatgtggcttcggtcacacc
gcgatgatccagttcggtcgcgagtactgttcggcccgcaaaccggcgtgtctcgacgat
cccgaggcctgtccgctggctgatcagtgcgaacagctcggcgtctcaccggcgaccggc
gaggtgttcgatcccgccgagcgagcagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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