KEGG T00397: HNE

Hyphomonas neptunium: HNE_0312

Entry

HNE_0312 CDS T00397

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

hne Hyphomonas neptunium

Pathway

hne00020	Citrate cycle (TCA cycle)
hne00310	Lysine degradation
hne00380	Tryptophan metabolism
hne01100	Metabolic pathways
hne01110	Biosynthesis of secondary metabolites
hne01120	Microbial metabolism in diverse environments

Module

hne_M00009	Citrate cycle (TCA cycle, Krebs cycle)
hne_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:hne00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:hne00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:hne00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh SH3_5

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

306324..309332

AA seq 1002 aa
MADDGSPVNGPRSTGNAAMLDTAFLYGASAQWLEQMQAAYAKNPNSVPESWRAFFAELGD
EPASAKQNADGASWKRKDWPRPASSEQIAAFDGDWALLEPKIEKKIKSGAPGIAAEDLGR
AVTDSIRALMMIRAYRMRGHLAAQLDPLGLSGFGDQPELDPASYGFGPADMDRSIYIDGY
LGLDRATPAQMLDILRRTYCSTLGIEFMHISDPEEKSWLQERIEGPDKGVAFTREGKIAI
LRKLIEAEAFERFLHKRYPGTKRFGLDGGEAAVPALEQIIKRGGALGVNEIIVGMPHRGR
LNMLAAVMGKGYEKIFHEFQGGSTQGAGEFGSGDVKYHLGASSDREFDGNVVHLTMNPNP
SHLEAVNPVVLGRTRAKQFMESRETGKLDRSHKMPLLLHGDAAFAGQGVVAECFALSGLQ
GYRTGGTIHFIVNNQIGFTTSPMYSRSSPYPSDVALMVQAPIFHVNGDDPEAVVYAAKVA
TEYRQKFAKDVVIDMFCYRRFGHNEGDDPTMTQPVMYRVIKERPSTREIYAQRLVAEGLL
TAAEVETQVKEFEDFLDRAFDAGKTLKTNKADWLEGQWSGFGLPLDDDRRGKTGVSKTRL
KELGDAITAIPENVDAHKTVERVLARRRESYETGKEIDWGGAEHLAFASLVDEGFPVRLS
GQDSGRGTFVQRHSHIVDQTTGDRITLLNQIREGQAPYEVIDSLLSEEAVLGYEYGYSLT
DPNTLTCWEAQFGDFANGAQVYYDQFISSAERKWLRMSGLVMLLPHGYEGQGPEHSSARL
ERFLQMCAEDNMQVCNLTTPANYFHALRRQIHREFRKPLVIMTPKSLLRHKLATSTLDDM
NTKSTFHRILWDDAETPGREGKVKLAKDNKVRRVVLCSGKVYYDLFEAREASGQDDVYLL
RVEQFYPVPRKSLITELKRFPQAELVWCQEEPRNMGGWTFIRDEIEWCAAQAGYKQPRPK
YAGRPPSAATATGLLSKHQAEQANLLKTALSPDPVDDRIVSP

NT seq 3009 nt +upstreamnt +downstreamnt
atggccgacgatggcagcccggtgaatggcccccgcagcacgggcaatgcggcaatgctg
gatactgcgtttctctacggggcttctgcccagtggctggaacagatgcaggcggcttac
gccaagaaccccaattctgtgcccgaaagctggcgcgccttctttgccgaactcggcgat
gaaccggctagcgccaagcagaatgcagacggcgcaagctggaagcgtaaagactggccc
cgtccggcctcaagcgagcagattgccgcttttgacggcgactgggccctgctcgaaccc
aagatcgagaaaaagataaagtcgggtgcccccggcattgcggcggaagatcttggccgc
gcggtcaccgattccattcgcgcgctgatgatgatccgcgcttaccggatgcgcggtcac
ctggccgcccagctcgacccgctcggcctctccggctttggcgaccagcccgagcttgat
ccggccagctatggctttggcccggcggacatggaccgcagcatctatatcgacggctat
ctcggcctcgatcgtgccacgccggcgcagatgctggacatcctgcgccgcacctattgc
tcgacgctcggcatcgagttcatgcacatttctgatcctgaagaaaaatcctggcttcag
gagcggatcgaaggccccgacaagggcgttgccttcacccgcgaaggcaagatcgcaatc
ctgcgcaagctgatcgaagctgaagccttcgaacgcttcctccacaagcgctaccccggc
acgaaacgtttcggtctggatggcggcgaggcggctgttcccgcgctggaacagatcatc
aagcgcggcggcgccctcggcgtgaacgagatcatcgtcggcatgccccaccgcggccgt
ctcaacatgctcgcggccgtcatgggcaagggctacgaaaagatcttccacgaattccag
ggcggctcgacgcaaggggccggcgaattcggctcgggcgacgtgaaataccacctcggc
gcctcgtcggaccgtgagtttgacggcaatgtcgtccacctcaccatgaacccgaacccg
tctcaccttgaagcggtgaacccggttgtgctcggccgcacgcgcgccaagcagttcatg
gaatcgcgcgagaccggcaagctcgaccgctcccataagatgccgctgcttttgcacggg
gacgcggcctttgcggggcagggcgtcgtggcggaatgtttcgcgctgtcgggccttcag
ggctaccgcacaggcggaaccatccacttcatcgtcaacaaccagatcggcttcactacc
agcccgatgtattcgcgctcctcgccgtatccctcggatgtggcgctcatggtgcaggcg
ccgatcttccatgtgaacggcgatgaccctgaagcggttgtctatgccgccaaggtcgcc
accgaataccgccagaagtttgcaaaagatgtcgtcatcgacatgttctgctaccgccgc
ttcggccacaatgagggcgatgatccgacgatgacccagccggtcatgtaccgcgtcatc
aaggaacgtccgtctacgcgcgaaatctatgcgcagcgcctcgtcgccgagggcctgctg
acggccgctgaggtcgaaacacaggtgaaggagttcgaggacttcctcgaccgcgccttc
gatgcgggcaagacactgaaaaccaacaaggccgattggctggaaggccaatggtcgggc
ttcggcctgccgctggacgatgaccggcgcggcaagaccggcgtttccaaaacgcgtttg
aaggaactcggtgacgcgatcaccgccattcctgaaaacgtggacgcgcacaagacggtg
gagcgcgtgctcgcccgccgccgcgaaagctacgaaaccggcaaggaaatcgactggggc
ggcgcagaacatctcgccttcgccagccttgtggatgaaggtttcccggtgcgcctctcc
ggccaggattccgggcgcggcacgttcgtgcagcgccacagccatatcgtcgaccagacg
accggcgaccggatcacgctgctcaaccagatccgcgaaggccaggcgccttatgaagtg
atcgactcgctcctctccgaggaagccgtgctcggttatgaatatggctactcgctgacc
gatccaaatacgctcacctgctgggaagcccagttcggcgacttcgccaacggcgcgcag
gtctattatgaccagttcatttcctcggccgagcgtaaatggctgcgcatgtcgggcctc
gtgatgcttctgccgcatggctatgaaggtcagggcccggagcattcctccgcccgcctt
gagcgcttcctgcagatgtgcgcggaagacaacatgcaggtgtgcaacctgacgacgccg
gcaaactatttccacgccctgcgccgccagatccatcgcgagttccgcaaaccgttggtc
atcatgacgcccaaatcgctgctgcgccacaagctggccacctcgacactggacgacatg
aacaccaagtcgaccttccaccgcatcctctgggacgacgccgaaacgcccggccgcgaa
ggcaaggtgaagctcgccaaggacaacaaggtccgccgcgtcgtgctgtgttcgggcaag
gtctattacgacctcttcgaagcgcgcgaagcctccggccaggacgatgtttacctcctg
cgcgtcgagcagttctacccggtgccacgcaagtcgctgatcaccgagctgaagcgcttc
ccgcaggcagagcttgtctggtgccaggaagagccccgcaatatgggcggctggaccttc
atccgtgacgagatcgaatggtgcgcggctcaggcaggctacaaacagccgcgcccgaaa
tatgccggccgtccgccctcggcggcgaccgcaacgggcctcctgtccaagcaccaggcc
gaacaggccaaccttctcaagacagccctctcgcccgacccggtcgatgaccggatcgtt
tctccctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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