KEGG   Hyphomonas neptunium: HNE_0673Help
Entry
HNE_0673          CDS       T00397                                 

Definition
ribonuclease
Orthology
K08300  
ribonuclease E [EC:3.1.26.12]
Organism
hne  Hyphomonas neptunium
Pathway
RNA degradation
Class
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:hne03018]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JCVI-CMR: 
UniProt: 
Position
complement(679299..682028)
Genome map
AA seq 909 aa AA seqDB search
MSRLMLIDAAHPEETRVAIVNNGQVDDFDFEATGNEQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQLPAADRELLLKEAAEEAAAAIEDDDDGPYVPHGMSSEMGN
GASDEGDEDDDHGDDGDEDTASADDDGEDEGDDAAPRAAKPARRNAKKQTQRTPISKRYK
IQEVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTPRGGGISRKIVNSADR
KRLKSIVSELDVPEGQGLIVRTAGAKRTKIEIKRDYDYLSKLWEQIVEKTLSSEAPALIN
AEGGLVHRAMRDMFDKEIEEVWVQGDEAYREAKDLAKIIMPSQAKKVQQWREEDPLYVAE
AVENQLDSIYSPVVQLKSGGYLVINQTEALVAIDVNSGKSTRERNIEQTAVRTNLEAAEE
ACRQMRLRDLAGLIVIDFIDMEENKNNRAVEKRLKECLKVDRARVQHGRISQFGLMEISR
QRRRQGVLQATSDPCSACNGTGRRRSIPSAALQLIRAIEARAATGGLKGIGVKAPTDVAL
YILNNKREALIEIERLAGFAISIHSSEDMLPGDFQIDADRDPNAKPKKRSTPRSLMKPTP
PSARDDDDEEIDDEDVIEDEAGEDDDGETPAAAANKDKQGGGRRRRRRGGRNRGEARETG
LEVVDAEPAADADASEDDDDEDDGEDTSNGSAEAGSDDSDAARKRRRRGRRGGRRRRRGG
EGRGENGDIAAIADGGAFLDGLSVSADVMLSEDEPAIGLPAAADTQDTDDESETKAAPAE
AAADAAETDEAPAATEEAAPRPARSRSRRGRGSKPAPEETPSAEETAPAAEAEAEAEAEA
PVVEAAQEAAPEPVAEAEPEPEMAQADFAPPKAAAVEAEPAPEPEGAPAPSAAEPPAPKR
AGWWNRGKK
NT seq 2730 nt NT seq  +upstreamnt  +downstreamnt
atgagcagattgatgctgatcgacgctgcccaccccgaagaaacgcgggtggccatcgtc
aacaacggccaggttgacgatttcgactttgaggcaaccggcaacgaacaactccgcgga
aacatctatctcgccaaagtgacccgtgtggagccgtcgctccaggcggcttttgtcgag
tatggtggcaaccgccacggttttctcgccttcagcgagattcaccccgattattaccag
ctgcccgccgctgaccgcgaattgctgctgaaggaagcggctgaagaggccgccgccgcc
atcgaagacgatgatgatggcccttacgtgccccatggcatgagctccgagatgggtaac
ggcgcctctgatgagggcgacgaggacgacgatcacggcgacgatggcgatgaagacacc
gcctctgccgacgatgacggcgaggacgaaggcgatgacgccgccccgcgcgccgccaaa
ccggcccgccgcaatgccaagaagcagacccagcgcacgccgatttccaagcgctacaag
atccaggaagtcatccgccgccgtcaggtgatgctggtgcaggtggtcaaggaagaacgc
ggcaacaaaggcgccgcgctcaccacctatctctcgctggcagggcgctactccgttctg
atgccgaacaccccgcgcgggggcggcatttcccgcaagatcgtcaattcggccgaccgc
aagcgcctgaaatccatcgtttcggaactggatgtgcccgaaggccagggcctgatcgtg
cgcacggccggcgccaagcgcaccaagatcgaaatcaagcgcgactatgattacctctcg
aaactgtgggaacagattgtcgagaagaccctttcctccgaagccccggcgctgatcaat
gccgaaggcggcttggtgcaccgggccatgcgggacatgttcgacaaggaaatcgaggaa
gtctgggttcagggcgatgaggcttaccgcgaggccaaagaccttgcgaagatcatcatg
ccgagccaggccaagaaggttcagcaatggcgcgaggaagacccgctctatgtagctgaa
gcagtcgagaaccagcttgattccatttactctcccgtcgttcagctgaaatcaggcggc
tatctggtgatcaaccagaccgaagccctggtcgccatcgacgtgaactcgggcaaatcg
acccgcgagcgcaatatcgagcagacggctgtacgcaccaacctggaagcagctgaagaa
gcctgccgccagatgcgcctgcgcgaccttgccggcctcatcgtgatcgatttcatcgac
atggaggagaacaagaacaatcgcgcggtcgaaaagcgcctgaaggaatgcctgaaggtg
gaccgggcgcgcgtgcagcatggccgcatctcgcagttcggcctgatggaaatttcccgc
cagcgccgccgccagggcgtgttgcaggcaacctccgacccctgctctgcctgtaacggc
acgggccgccgccgctcgatcccgtccgctgcgctgcagctgatccgggccatcgaagcg
cgcgcagcaaccggcggcctcaaaggcattggcgtgaaagcgccaaccgatgtggcgctc
tatatcctcaacaacaagcgcgaggcgctgattgaaatcgagcggctcgcgggctttgcg
atctccatccactcctccgaagacatgctgccgggcgatttccagatcgacgccgaccgc
gacccgaacgccaagccgaagaaacgctccacgccgcgctcgctgatgaagccgacgccg
ccgtctgcacgcgacgacgacgatgaagagatcgacgacgaagacgtgatcgaggacgag
gccggcgaagacgatgacggcgaaacgcccgctgcggctgcaaacaaagacaagcaaggt
ggcggacgccgccggcgccgtcgcgggggccgcaatcgcggtgaagcccgcgagacgggc
cttgaagtggtcgacgccgaaccagccgctgatgctgacgcaagcgaagacgatgacgac
gaggacgacggcgaggacacctccaatggcagcgcggaagcgggctccgatgacagcgac
gccgcgcgcaagcgccgccgccggggacgccggggtggacgccgccggagacgtggcggt
gaaggccgcggcgagaatggtgacattgccgccattgccgatggtggggctttcctggat
ggcttgtctgtcagcgccgatgtgatgctgtccgaagacgagcctgcgatcggcctgccg
gcagctgccgatacgcaggacacggacgacgagtcggagacgaaagcggcccctgccgag
gcagcagctgacgccgccgagaccgatgaggcgccagctgccactgaagaggccgcgcca
cgccccgccagatctcgctcacgccggggacgcggcagcaaaccggctccggaagaaaca
ccgtcagctgaagaaaccgcgcctgcggcagaagctgaagccgaagccgaagccgaagcg
ccggttgtggaggctgctcaagaagctgcgccagagccggtcgccgaagccgagccggaa
cctgaaatggcccaggctgattttgcgccgcccaaagccgccgctgttgaggctgaacct
gcgccggaaccagagggtgcgcccgctccctctgcggcagagccccctgctccgaagcga
gcgggctggtggaaccgcgggaagaagtga

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