KEGG   Hyphomonas neptunium: HNE_2040
Entry
HNE_2040          CDS       T00397                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hne  Hyphomonas neptunium
Pathway
hne03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HNE_2040 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hne03400]
    HNE_2040 (nth)
Enzymes [BR:hne01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HNE_2040 (nth)
DNA repair and recombination proteins [BR:hne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HNE_2040 (nth)
 Prokaryotic type
     HNE_2040 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S HHH_8 HHH_5
Other DBs
NCBI-ProteinID: ABI76505
UniProt: Q0C0K5
Position
complement(2116762..2117526)
AA seq 254 aa
MPQPMPDASKPARKPAKAVPRSKFTRARAAELFAALAADRPDPATELEFVNPFTLLVAVA
LSAQATDVGVNKATRKLFAVADTPEKMLTLGEEGVASHIRTIGLWRNKAKNVIALSRRII
EEYGGEVPRTRDELTTLPGVGRKTANVVMNEAFGEPTIAVDTHIFRVSNRTGLAPGKTPD
HVETGLERITPPEFKKGAHHWLILHGRYVCKARTPECWHCAIKDLCDFKPKTPDPAAQAA
LGPKKPRKSAGAAK
NT seq 765 nt   +upstreamnt  +downstreamnt
atgcctcagcctatgcctgatgcttccaaacctgcccgcaagcccgccaaagccgtcccg
cgctcaaagttcacccgcgcgagggcggcggagctctttgccgcgcttgccgcagaccgc
cccgatccagcgaccgagttggagttcgtaaaccccttcaccctgctcgtcgccgtcgcc
ctgtccgcgcaggccaccgatgtcggtgtgaataaagccacgcggaagctgttcgctgtc
gccgacactcccgaaaaaatgctcacccttggtgaggaaggggtggccagccacatccgg
accatcggcctctggcgcaacaaggcaaagaacgtcatcgcgctcagccgcaggatcatc
gaggaatacggcggcgaggtgccgcgcacgcgggatgaactcaccaccctgccgggcgtg
ggccgcaagaccgcaaatgtcgtcatgaacgaagccttcggtgagcccacgatcgccgtc
gacactcacatcttccgtgtttccaacagaaccgggctcgcgcccggcaagacgcccgac
catgtcgagacgggcctcgagcgcattaccccgccggaattcaagaagggcgcccatcac
tggctgatcctgcacgggcggtatgtgtgcaaggcgcgtacccccgaatgctggcactgt
gcgatcaaggatctctgtgatttcaagccgaaaacgcccgacccggcggcccaggccgcg
ttagggccgaaaaaaccccgcaaatccgctggcgccgcaaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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