KEGG   Hyphomicrobium nitrativorans: W911_07570
Entry
W911_07570        CDS       T02943                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
hni  Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:hni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hni03016]
    W911_07570
Enzymes [BR:hni01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     W911_07570
Transfer RNA biogenesis [BR:hni03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    W911_07570
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: AHB48279
UniProt: V5SE87
Position
1589725..1591137
AA seq 470 aa
MEDLDSSPYAETAPQAGAADGEPAPAKRVFIKTFGCQMNVYDSERMGEALAAEGYVATEN
PADADLAILNTCHIREKAAEKVYSDLGRLRDIKSARAGEGKETRIAVTGCVAQAEGAEIV
ARQPAVDLVIGPQSYHRLPELLTRVRSGEGGLVETEFPDEDKFKALPSRRPAASVSAFLT
VQEGCDKFCTFCVVPYTRGMEFSRPVASLVDEAKRLVERGVRDVTLLGQNVNGYHGEGAD
GGPATLARLIHELAAIDGLWRIRYTTSHPRDMSDDLIAAHRDVDKLMPYLHLPFQAGSDR
ILAAMNRKHTVREYLELIQRVRDARPDIALSTDIIVGFPGETDEEFEETLAVVRDVKFAH
AFSFKYSPRPGTPASTMDGQVPEEAKRERLERLQDAIDQGHAAFNLASVGRTLPVVFEKP
GRREGQLVGRSPYLQLVHADAGPELIGQMVNVEIRAARANSLSGVIGTSE
NT seq 1413 nt   +upstreamnt  +downstreamnt
ttggaagatctagactcatcgccttacgccgagacggcgccccaggccggggccgccgac
ggtgagcccgcgcctgcgaagcgcgtgttcatcaagacattcggctgccagatgaacgtc
tacgattccgaacggatgggggaggcgctggcggccgagggatatgtcgcaaccgagaat
ccggcggacgccgatctcgccatactgaatacgtgccacatccgcgagaaggcggcggaa
aaagtctattccgatctcggccggctgcgcgacatcaagagcgcgcgggccggcgagggt
aaggaaacgcgcatcgcggtcacgggatgcgtggcgcaggcggagggtgcggaaatcgtc
gcccgccagccggccgtcgatctcgtcatcgggccgcagagctatcaccggctaccggag
cttctgacccgggttcgaagtggcgaaggcgggctcgtcgagacggagtttcccgacgag
gataagttcaaagcgctgccgagccgccggccggcggcgtcggtttcggctttcctcacg
gtgcaggaaggttgcgacaagttctgtacgttctgcgtcgtgccctatacgcgcggcatg
gagttctcgcggcccgttgcgagcctcgtggacgaggcgaaacgccttgtcgagcgcggc
gttcgcgacgtcacgctgctcggacagaacgtcaacggctatcacggcgaaggagcggac
ggaggcccggcgacgcttgcgcggctgatccatgagcttgcggctatcgacgggctctgg
cgcattcgctacacgacgagccatccgcgcgacatgagcgacgatctcatcgcggcgcat
cgcgacgtggacaagctgatgccatatctgcatctgccgttccaggccggttcggatcgc
attctcgcagccatgaaccgcaaacacacggtgcgcgagtacctcgaactcattcagcgc
gtccgcgatgcgcggcccgacatcgcgctctcgaccgacatcatcgtgggctttcccggc
gagacggacgaggagttcgaggagacgcttgccgtcgtgcgggacgtcaagttcgcacat
gcgttctcgttcaaatacagtccgcgtcccggcacgcctgcgtccacgatggatgggcag
gttccggaagaggccaagcgcgagcggctcgaacggcttcaggacgcgatcgaccagggg
catgccgcgttcaacctcgcatcggtgggacgcacgcttccggtggtgttcgagaagccg
ggccggcgcgagggccaacttgttgggcgctcgccttatcttcagctcgttcatgccgat
gcaggcccggaattgatcgggcagatggtgaatgtggagatccgcgctgcacgtgcgaac
agtctgtctggtgtcatcggtacgtcagaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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