KEGG T01103: Hoch

Haliangium ochraceum: Hoch_5748

Entry

Hoch_5748 CDS T01103

Definition

RecD/TraA family helicase (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

hoh Haliangium ochraceum

Pathway

hoh03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:hoh03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 HHH_5 AAA_28 HHH_2 AAA_16 Helicase_RecD NTPase_1 AAA_29 HHH AAA AAA_5 RuvB_N ArgK PIF1 AAA_18 AAA_22 AAA_17 IstB_IS21 Mg_chelatase DUF258 DUF2075 UvrD_C NACHT

Other DBs

NCBI-GI:

262198909

NCBI-GeneID:

8548162

UniProt:

D0LH80

Position

7881249..7883555

AA seq 768 aa
MAGSPGNGPRTERHRQRRTPVADDPAQTGSVVEGTLTRIVYENADTHWTVARVRVGDDEA
GTTRDPAARAEGEITVVGSMVGVAPGTPLRLRGTWEQHNSYGRQFRVHSYQARMPETIAG
LERYLGSGEFRGIGPELAKRIVEHFGLEALSVIEKAPKRLQEVDGIGAARAEKIAEAWTA
QRDVHDVMVFLRGYGVTASQAARIHKRYGNRAEAIVRENPYRLALDIWGIGFKTADSIAQ
NLGMARDAPERLEAGLIHVLGKLAEDGHVHVPEPNLLDTAAGILEVDAMLLPEALDRLET
SQLVVCEALGDRGTCVSLTFLWQHESDAAARYAALVETPMRPRKLDLDQALAAFEAEAEL
ALTAEQRRAALAAVMDKSVVLTGGPGVGKTTIVRAIVFLFERLGRSVTLAAPTGRAAKRL
AESTARDAATIHRLLEFQPAGGGFFRSADNPLDSDVVIIDETSMVDIALLAALLDAMPAS
AQLVLVGDIDQLPSVGPGAVLADLIASRAATVVRLTEIFRQARESRIVMAAHEINSGMVP
QLAPPQGTSAHRSDFYFISREQPVRARETIVDLVAERIPEAFGFDPLADIQVLCPVHRGE
LGTIALNRALQERLTPAVDEQHQVTRGERSYRVGDKVMQLENDYDRGVFNGDIGVIFEIA
GERKKVLVDYMDGRVVGYEARDLDQLTHAYAISVHKSQGSEYPVVVLPLATQHYIMLQRN
LLYTAVTRGKSLVVIVGSAKAVRRAVENQTNTARWTWLAERIREQLGE

NT seq 2307 nt +upstreamnt +downstreamnt
atggcaggcagccccggcaacggcccgcggacagagcgccacaggcagcgacgcacacct
gtggccgatgatcccgcccagacaggttcagtcgtcgagggcaccctgacgcgtatcgtc
tacgagaacgcggacacccactggaccgtggcgcgggtgcgggtcggcgacgacgaggcc
ggcacgacgcgcgatccggccgcgcgcgccgagggcgagatcaccgtggtgggctcgatg
gtcggcgtggccccgggcacgccgctgcgcctgcgcggcacctgggagcagcacaacagc
tacggccggcagtttcgcgtgcacagctaccaggcgcgcatgcccgagaccatcgccggg
ctcgagcgctacctcggctccggcgagtttcgcggcatcggccccgagctggccaagcgc
atcgtcgagcacttcggcctggaggcgctgagcgtcatcgagaaggcgcccaagcggctg
caggaagtcgacggcatcggcgccgcgcgggccgagaagatcgccgaggcgtggaccgcg
cagcgcgacgtccacgacgtcatggtgttcttgcgcggctacggcgtcaccgcgtcgcag
gccgcgcgcatccacaagcgctacggcaatcgcgccgaagccatcgtgcgcgagaacccc
tatcgcctcgcgctcgacatctggggcatcggcttcaagaccgccgacagcatcgcccag
aacctgggcatggcgcgcgacgcgcccgagcggctcgaggccggcctgattcacgttctc
ggcaagctggccgaagacggccacgtgcacgtgcccgagcccaacctgctcgacaccgcg
gccggaatcctcgaggtcgacgccatgctcttgcccgaggcgctcgaccggctcgagacc
tcgcagctcgtggtctgcgaggccctgggcgaccgcggcacctgcgtctcgctcaccttc
ctgtggcagcacgagagcgacgccgccgcgcgctacgccgccctggtcgagaccccgatg
cggccgcgcaagctcgatctcgaccaagccctggccgcgttcgaggccgaggccgagctc
gcgctcacggccgagcagcggcgcgccgccctggccgcggtgatggacaagagcgtggtg
ctcaccggcggccccggcgtcggcaagaccaccatcgtgcgcgcgatcgtgttcctgttc
gagcgcttggggcgcagcgtgaccctggccgcgccgaccgggcgcgcggccaagcgcctg
gccgagagcaccgcgcgcgacgccgccaccattcatcgcttgctcgagtttcagcccgcg
ggcggcggcttctttcgcagcgcggacaatcccctcgacagcgatgtggtcattatcgat
gagacctcgatggtcgatatcgccctgctcgccgccctgctcgacgccatgcccgcgagc
gcacagctcgtgctggtcggcgatatcgaccagctcccgtccgtgggcccgggcgccgta
ctcgccgacctcatcgcctcgcgcgcggccaccgtcgtgcgcctcaccgagatctttcgg
caggcgcgcgagagccgcatcgtcatggccgcgcacgagatcaacagcggcatggtgccg
cagctcgcgccgccgcagggcaccagcgcgcatcgctcggatttctacttcatctcgcgc
gagcagcccgtgcgcgcgcgcgagaccatcgtcgatctggtcgccgagcgcatccccgag
gcctttggattcgacccgctggccgatatccaggtgctgtgtccggtgcatcgcggcgag
ctgggtacgatcgcgctcaaccgcgccttgcaggagcggctcacgcccgcggtcgatgag
caacatcaggtgacgcggggcgagcgcagctatcgcgtgggcgataaagtcatgcagctc
gagaatgactacgaccgcggcgtgttcaacggcgatatcggcgtgatcttcgagatcgcg
ggtgagcgcaagaaagtcctcgtcgattacatggacggacgcgtggtcggatacgaggcc
cgcgacctcgaccagctcactcacgcgtacgcgatcagcgtgcacaagagccagggctcg
gagtatccggtcgtggtgctgccgctggccacgcagcactacatcatgttgcagcgcaat
ctgctgtacactgccgtaacccgcggcaaatcgctggtcgttatcgtcggctcggcgaaa
gccgtgcgccgggcggtcgagaatcagaccaataccgcgcgctggacctggctcgccgaa
cgcatccgcgaacagctcggcgaatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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