KEGG T00838: Hore

Halothermothrix orenii: Hore_02290

Entry

Hore_02290 CDS T00838

Definition

ATP-dependent DNA helicase PcrA (EC:3.6.1.-)

Orthology

K03657

DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]

Organism

hor Halothermothrix orenii

Pathway

hor03420	Nucleotide excision repair
hor03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:hor03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:hor03430]

SSDB

Motif

Pfam:

UvrD_C UvrD-helicase AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 Exonuc_V_gamma CarD_CdnL_TRCF AAA_14

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

233978..236125

AA seq 715 aa
MLSDSSDILTGLNPEQKKAVEHFEGPLLILAGAGSGKTRVLTHRIAYLIENYGVNPLQIL
AVTFTNKAAGEMKERVDNLLGGMAGDLWVSTFHSLCARILRKEIGKIGYDNNFVIFDTDD
QQKLISRILKELNLDPKKTRPRAILSEISRAKNELIDPRSYANNVGDYFQDITARIYPLY
QERLKESNALDFDDLIMKTIEVFVDNPMVLEYYQERFKYILVDEYQDVNFAQYKLVQLLA
NKYRNLCVVGDPDQGIYGFRGADIRNILNFEEDYPEARVIKLEQNYRSKEKILKAAHHVI
RNNTARKEKRLWTKRGKGEDLKLYVAFDDKDEASYVCRKIKELKREKNYKFSDFAVLYRT
NSQSRSVEEMMVKYAIPYQIVGGFRFYDRMEIKDILAYLRVIYNPSDEVSLLRIINRPKR
GIGQGTISKLSRYARERGISLYKAGTEAESNPYLTASFKKRVKAFFDLLEELREKSETLS
IDTLTHQVVTRTGYQRELNEEGTQQARNRLENIQELFSVIEEFMKGNENKTLGAFLEEVS
LISDVDNMEDNQNVVTLMTLHSAKGLEFPVVFIIGMEEGLFPHANSMMDHEELEEERRLC
YVGITRARDELYLTRARERMRFGQRKPYPPSRFLDEIPPQLFEDNNDKKEEILGNIKEKE
SKTGEYKVGDTVVHPRWGKGQIVGVRENRGLELKINFGKGKVKTLLAEYAPIQKA

NT seq 2148 nt +upstreamnt +downstreamnt
ttgttgtctgatagcagtgatattctgacaggattaaatcctgaacaaaagaaagctgta
gaacattttgaaggccccctgttgattttagcgggggccggtagtgggaaaaccagggtg
ttaacccaccgcattgcatatctaattgaaaattatggtgttaatccccttcagatactg
gcagtaacctttaccaataaggctgccggtgagatgaaggagagggttgataatcttctg
ggaggaatggctggagacctctgggtcagcacctttcattcattatgtgcccgtatttta
cggaaagagataggtaagatcggttatgataataactttgtaatcttcgataccgatgac
cagcagaaattaatatccaggattttaaaagaattaaatctcgatccgaaaaaaaccagg
ccaagggctatcttatctgaaattagcagggccaaaaatgagttaattgatccccggtcc
tatgccaataatgttggtgattactttcaggatataacagcccgtatttatcccctgtac
caggaaaggcttaaggagagcaacgctcttgattttgacgatttaattatgaaaaccatt
gaggtttttgtggacaaccccatggttttagagtattaccaggaacgattcaagtatatc
cttgttgacgagtaccaggatgttaactttgcccagtataaactggttcaactcctggcc
aataaataccggaatctctgtgttgtcggtgaccccgaccagggaatatacggtttccgg
ggggctgatattcgtaatatccttaattttgaggaagattacccggaggccagggttata
aagctggaacagaactaccgctccaaagagaaaatattaaaggctgcccatcatgtcatc
cgcaataatacagcccgtaaggaaaagcgtctctggacaaaacggggtaaaggtgaagat
ttgaagctttatgtggcttttgatgacaaagatgaggcttcctatgtctgccggaaaata
aaagaattaaagagggagaaaaattataaatttagtgattttgctgtgctctaccgtacc
aattcccagtcccggtctgtagaagagatgatggttaagtatgccataccttaccagatt
gttggtggatttcggttttatgaccggatggaaattaaagatattctggcctatctcagg
gttatctataatccatccgatgaagtcagtttattgcggattattaatcgtcctaaaagg
ggcatagggcagggaaccattagcaagttatcaagatatgccagagagagggggataagc
ctgtataaggctggaacagaggcagaatctaacccttatcttaccgcttcttttaaaaag
agggttaaagccttttttgaccttcttgaggaactgagggaaaaaagtgaaaccttaagt
attgatacgttaacccatcaggtagtgaccagaacggggtaccagcgtgaacttaatgaa
gaaggtacccagcaggcccgaaaccggctggaaaatatccaggagttattttcagtgatt
gaggagtttatgaagggtaatgaaaataaaactctgggtgctttcctggaagaagtatca
ctcatttctgatgtagataatatggaggataatcagaatgtggttaccctgatgacactc
cattctgccaaagggctggaatttccagttgtttttattatcggaatggaagagggttta
ttccctcacgccaactccatgatggatcatgaagaactggaagaagagaggcgattatgt
tatgttggtataaccagggccagggacgaactatatttgactagggcccgggagcggatg
aggtttggtcaacggaaaccctaccccccttccaggtttttagatgaaattcctccacag
ttatttgaggataataatgataaaaaagaggaaatattgggtaatataaaagagaaagaa
agtaaaaccggagaatataaagtaggagatacagtggttcaccccaggtggggaaaagga
cagattgtaggtgtcagggaaaacagggggcttgagcttaagataaacttcggaaaaggg
aaggtgaaaactcttctggccgagtatgcccccattcagaaggcttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-HOR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF

DBGET integrated database retrieval system