KEGG   Helicobacter pylori HPAG1: HPAG1_0477
Entry
HPAG1_0477        CDS       T00365                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hpa  Helicobacter pylori HPAG1
Brite
KEGG Orthology (KO) [BR:hpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpa03032]
    HPAG1_0477
   03400 DNA repair and recombination proteins [BR:hpa03400]
    HPAG1_0477
Enzymes [BR:hpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPAG1_0477
DNA replication proteins [BR:hpa03032]
 Prokaryotic type
  DNA Topoisomerases
   HPAG1_0477
DNA repair and recombination proteins [BR:hpa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPAG1_0477
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ABF84544
UniProt: Q1CU28
Position
493399..495720
AA seq 773 aa
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNIGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTSEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYKDGLKQFVKDSAKKELLTPVIA
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEAHYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatataggcgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgtgatacaattaatatcact
ttgactagtgaggggtcatgcattgtagaagataacgggcgaggcattcctgtagatatc
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgattatgaccattaaaaaagagggtcaaatctaccgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaaacgcttcaaagaaatggcgtatcttaacgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttttataaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaattgctcacccccgttattgcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctttagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataacattaaaacttctgagggcggcacg
catgaggcgggctttaaaatgggcttgtctaaggcgattttgcaatacattgacaataat
attaaaactaaagagtcgcgccccatctctgaagacattaaagaggggttgatcgctgtt
gtgagcttgaaaatgagcgagcctttgtttgaagggcagactaaatccaagctcggcagt
tcgtatgcacgcgcgttagtttcaaaattagtctatgataaaatccatcagtttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagccctactagctgcaaaagccaga
gaagccagtaagaaagccagagagcttacaaggaaaaaagataatttgagtgttggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgaaatcttttta
gtggagggcgatagtgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatcctg
aaatcagaagaaattaaaaacatgattacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaaaggcaagacagaa
atctatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcgcgccat
taccgctacgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgccttaagccttgatatgaaagttttagaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttgctactgaagaaagcttg
catttgcacgcgcaaacccctaagggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgcattacacttaccaaaagcttatggaatataattta
gatttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttgatcaaacttaaaattgaagatttagaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagacgtgaaacaactagatgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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