KEGG   Glaesserella parasuis KL0318: JT17_08890
Entry
JT17_08890        CDS       T03312                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
hpak  Glaesserella parasuis KL0318
Pathway
hpak03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JT17_08890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpak03400]
    JT17_08890
Enzymes [BR:hpak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JT17_08890
DNA repair and recombination proteins [BR:hpak03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JT17_08890
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 AAA_22 AAA_19 TrwB_AAD_bind zinc-ribbons_6
Other DBs
NCBI-ProteinID: AIK90790
Position
1771722..1773935
AA seq 737 aa
MNLIQIALPVPLARYFDYLLPTHFENVVKGARVVVPFGRQRKIGIVVDFPTTSDIPTEKL
KPIEQLLDEQALFDTEMWQFLQWASRYYHAPFGEVLQSALPVKLRQGESSERTTSDYFVV
TENGRKALANGVVQKAKKQQELLSELAEFANFFEKPTACSPAVWKALLEKGYLEKLEIPF
NVQSWQEKLGEQPICNTQNRLTLNKQQTLVVSRLHYQQGFGAFLLNGVTGSGKTEVYLQV
IEEVLKRGEQVLVLVPEIGLTPQTIQRFQARFNVEIDALHSHLNDTQRLNAWLRAKNGES
AIVIGTRSALFTQFQQLGLIIIDEEHDGSFKQQDGWRYHARDLAVLRAKNNNIPIILGSA
TPSFESLQNVQNGKFIELQLTARAGNAHFSKQTLIDLKKQRIYSGLSEKLLAMMQAHLEK
GNQVMLFLNRRGFAPVLLCHECGWIADCPSCDKPFTYHQKQRVLRCHHCASQKAIPRQCG
HCGSVNLITTGIGTEQLEQVLAQRFPQYSITRIDRDSTARKGSLEQHLAEIQAGKSQILI
GTQMLAKGHHFPNVTLVAIVNVDSSLFSTDYRAEERLAQLYVQVSGRAGRAEKQGEVVLQ
THYPDHPLLTSLLNDGYLAFASQALAMRKIMSLPPFSSQVLIRATGRDSDKVANFLQDLT
ACLQQIIGENGWQGFQLLGPFNAPMAKKAGHYRWQLLIQHSARSAIQQLLDRFDEQKEQF
LRNDIRLTVDIDPQELG
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgaacctcatccaaattgcgctacccgtgccgttggcacgttattttgattacctgctt
ccaacgcattttgaaaatgtggtgaaaggggctagggtcgttgtgccttttggtcgccaa
cgtaaaatcgggattgtggtggactttccgaccacatcagatattcccaccgaaaaactg
aaaccgattgagcaactgttagatgaacaagctctgtttgacactgaaatgtggcaattt
ttacagtgggcaagccgttattatcacgcccctttcggcgaagtgctacaaagtgccttg
cctgtcaaattgcgacaaggggaaagtagcgaacgcaccacctcagactatttcgttgtc
acggaaaacggcagaaaagcacttgccaacggcgtggttcaaaaagcgaaaaaacaacaa
gagctattaagcgaactggcggaatttgcaaatttctttgaaaagccgaccgcttgtagc
cctgcggtttggaaagccttgcttgaaaaagggtatctggaaaagctggaaatccctttt
aacgtgcaaagctggcaggaaaaattaggcgaacagccgatttgcaacactcaaaaccgt
ttaacgttgaataaacagcagacccttgtcgtcagccgtttgcattatcaacaaggcttc
ggagcgtttttgctcaatggggtcactggctcagggaaaacggaagtctatctgcaagtg
atcgaagaagtgctgaaacggggcgagcaagtgttggtgttagtgcctgaaatcgggctg
accccacaaactattcaacgtttccaagctcgttttaatgtggaaattgacgcattgcat
tcccatctcaacgacactcaacggctcaatgcgtggcttcgggcaaaaaacggcgaaagt
gcgattgtgatcggcacacgttccgccttgttcacacagtttcagcaactcggcttaatt
atcattgatgaagaacacgacggctcgttcaaacagcaagacggctggcgttatcacgca
cgagatctggcagtgcttcgagcgaaaaataacaacattcctatcattctcggctcggca
acgcctagttttgaaagtttgcaaaatgtacaaaacggtaaatttatcgaacttcagctt
actgcaagggctggtaatgcacatttttccaaacaaaccttaattgatttgaaaaaacag
cggatttattcgggcttatcggaaaagttgttagcaatgatgcaagctcacttggaaaaa
ggcaatcaagtgatgttgtttttaaaccgacgggggtttgcccctgttttactttgccac
gaatgtggctggattgccgattgcccgtcctgtgataagccctttacctatcaccaaaaa
cagcgagtattgcgttgccatcactgtgcttcgcaaaaagccattccacgtcagtgcgga
cattgtggctcagtcaatttgattaccacagggatcggcacggaacagctggaacaagtg
ctggcacagcgttttccgcaatacagcattactcgtattgaccgtgacagcactgcccgt
aaaggctcgttggaacaacaccttgccgaaatccaagcaggcaaaagccaaattttgatc
ggcacacagatgttagccaaaggacaccatttcccgaatgttactttagtggcaatcgtg
aatgtggatagtagcctgttttccactgattaccgtgcagaagaacgtttggcacagctt
tatgtacaagtgtcagggcgagcagggcgggcggaaaagcaaggggaagtagtgctacaa
acgcattaccctgatcacccgttactgactagcttactcaacgacggctaccttgccttt
gcaagccaagccttagcgatgcgaaaaataatgagcttaccgccgttttcttcgcaagtg
cttattcgtgcaacgggtagagatagcgacaaagttgcaaattttctgcaagatttgacc
gcttgtttacaacaaattatcggtgaaaatggctggcaaggctttcagctactcggacct
ttcaacgctccgatggcaaaaaaagcagggcattatcgctggcagttacttattcaacat
tcggcaagaagtgcgatccaacagttgttagatcgttttgatgagcaaaaagaacagttc
ctgcgaaacgatattcgattgacggtggatattgatccgcaggagttggggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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