KEGG   Glaesserella parasuis KL0318: JT17_09280
Entry
JT17_09280        CDS       T03312                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
hpak  Glaesserella parasuis KL0318
Pathway
hpak00550  Peptidoglycan biosynthesis
hpak01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpak00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    JT17_09280
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hpak01002]
    JT17_09280
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpak01011]
    JT17_09280
Enzymes [BR:hpak01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     JT17_09280
Peptidases and inhibitors [BR:hpak01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   JT17_09280
Peptidoglycan biosynthesis and degradation proteins [BR:hpak01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   JT17_09280
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2
Other DBs
NCBI-ProteinID: AIK90856
UniProt: V9MIM6
Position
complement(1847640..1848821)
AA seq 393 aa
MLKSKVLKTVSLCAIACSSMNMAYAQDIDYGIPAPQLNAQTYILMDYNSGAVLASLNPDQ
HQAPASLTKMMTSYVVGEALKTGKIKNSDLVTVTENSWGQKFPGSSKMFLNVNQQVSVED
LNKGIIVVSGNDACVAIAEHISGSEQTFIDSMNKFVQKFGLKNTHFATVHGLDHPEQYSS
ARDMAIIGAHIIRDLPEEYKIYSEKEFTYNKITQPNRNGLLWDKSINVDGMKTGHTDQAG
YNLVASAYNSNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKPLSAGQSVLEQAVY
YGDLSKAQLGTLQDSYITVPKGKTAELKARYTLEKTNLEAPLVKGQVVGKVIYQLNGKDV
ASVDLQVMHDVQEAGIFGKAWDWFVLTVKGLFN
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgttaaaaagtaaagtactcaaaacggtcagtctatgtgctattgcttgttcaagtatg
aatatggcttatgctcaagatattgattatggtattccagcccctcaacttaatgcacaa
acctatattttaatggattacaattctggtgcagtattagccagtcttaatccagatcaa
caccaagcacctgcaagtttaaccaaaatgatgacgagctatgtagttggtgaagccttg
aaaacaggtaaaatcaaaaacagcgatttagtcaccgttaccgaaaactcttggggacaa
aaattccctggctcatctaaaatgttcttgaatgttaatcagcaggtgtctgttgaagat
ttgaacaaagggattatcgttgtgtcgggtaatgatgcttgtgttgcgattgcagagcat
atttcgggttcagagcaaacgttcattgatagtatgaataaatttgtgcagaaatttggt
ttaaagaacacacattttgcgacagttcacggtttagaccacccagaacaatactcatca
gcaagagatatggcgattatcggcgctcatatcattcgtgacttgcctgaagagtacaaa
atttattcagaaaaagagtttacctacaacaaaattacccaacctaaccgcaatggctta
ttgtgggataaatccatcaatgtcgatggaatgaaaacaggacataccgatcaagcaggc
tataaccttgtagcctcagcatacaatagtaatacccgtttaatctcagtggttatgggc
gtaccaacctataaagggcgtgaagtggaaagcaaaaaactgttacagtggggatttgct
aactttgaaactgtcaaaccactttcagcagggcaaagcgtgcttgaacaagcggtgtat
tatggtgatttaagcaaagctcaactaggcacattacaagatagttacattaccgttcca
aaaggtaaaacagcagaacttaaagctcgctacaccctagaaaaaacaaatttggaagct
ccgttagtgaaagggcaggtcgttggaaaagtgatttatcaactcaatggcaaagatgtg
gcgagtgttgatttacaagtaatgcacgatgttcaagaagcaggtatctttggcaaagcg
tgggattggttcgttttaacggttaaaggtctgtttaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system