KEGG T03301: JL26

Glaesserella parasuis SH03: JL26_01485

Entry

JL26_01485        CDS       T03301

Symbol

rluD

Name

(GenBank) 23S rRNA pseudouridylate synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

hpas Glaesserella parasuis SH03

Brite

KEGG Orthology (KO) [BR:hpas00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpas03009]
    JL26_01485 (rluD)
Enzymes [BR:hpas01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     JL26_01485 (rluD)
Ribosome biogenesis [BR:hpas03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    JL26_01485 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2 CT47 NepR

Other DBs

NCBI-ProteinID:

AIK16591

Position

239744..240721

AA seq 325 aa
MTQQITLQTEVTSDLLGARLDQALAQLFPDYSRSRIKVWIESDLVSVNGKIVNKAREKVF
GGELIEIQAEIEEEIRFEPQNIPLNIVYEDDDILVINKPKDLVVHPGAGNPDGTVLNALL
HHYPQIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVTALQKREITREYEAVASGIMT
QGGKVDEPMARHPTKRTAMAVHPMGKSAVTHYRIMERFRNYTRLRLRLETGRTHQIRVHM
AHIAHPLLGDQLYGGRPRPPKGASGEFLEVLRNFKRQALHATMLRLHHPITGELMEWHAP
LPDDFVELIEALKADYLLYKDELDY

NT seq 978 nt +upstreamnt +downstreamnt
atgactcaacaaataacattacaaactgaagtcacttcagatttattaggtgcaagatta
gatcaagctcttgcgcaacttttccccgattattctcgttcacgcattaaagtttggatc
gaaagtgatctcgtttcggtcaatggcaagattgtgaataaagctcgtgagaaagtattc
ggcggtgaattaattgaaattcaagcggaaattgaagaagaaatccgttttgaaccacaa
aatattccattaaatatcgtttatgaagatgatgatattttagtgattaataaacctaaa
gatttagtggttcaccctggggctggcaatccagatggcacggtgttaaatgccttgtta
caccattaccctcaaattgcagaagtgcctcgtgctgggattgtgcatcgtttggataaa
gataccacaggtttgatggtcgttgctaaaactgttccagctcaaactcaccttgtcact
gctttacaaaaacgtgaaattacccgtgaatatgaagctgtagcaagcggtattatgaca
caaggaggcaaagttgatgaaccaatggctcgccacccaactaagcgtaccgcaatggct
gttcacccaatggggaaatctgcggtaacacattatcgtattatggagcgtttccgtaat
tacacccgcttacgcttacgcctagaaaccgggcgtactcaccaaattcgtgttcatatg
gcacatattgcccacccattgttaggcgatcaactatatggcggtcgtcctcgtccaccc
aaaggggcaagcggtgagtttttagaggttttacgcaattttaaacgccaagcattacac
gcaacaatgcttcgcttgcatcaccctatcactggtgaactgatggaatggcacgctcca
ttacctgatgattttgttgaattaattgaggcattaaaagcggattatttgttgtataaa
gatgagttagattattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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