KEGG   Helicobacter pylori B38: HELPY_1255Help
Entry
HELPY_1255        CDS       T00950                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
hpb  Helicobacter pylori B38
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:hpb00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HELPY_1255 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HELPY_1255 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HELPY_1255 (trpB)
Enzymes [BR:hpb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HELPY_1255 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1258557..1259738)
Genome map
AA seq 393 aa AA seqDB search
MNKKAYFGEFGGSFVSELLVPALRELEQAFDACLKDEKFQKEYFHLLKDFVGRPSPLTLC
QNIVSNPKVKLYLKREDLIHGGAHKTNQALGQALLAKKMGKTRIIAETGAGQHGVATAIT
CALLGLKCVIFMGGKDIKRQEMNVFRMRLLGAEVREVNSGSATLKDAVNEALRDWASSYK
DTHYLLGTAAGPHPYPTMVKTFQKMIGDEVKSQILEQENRLPDYVIACVGGGSNAIGIFS
AFLNDKEVKLIGVEPAGLGLETNKHGATLNKGRVGILHGNKTYLLQDDEGQITESHSISA
GLDYPGVGPEHSYLKGIGRAVYESASDAEALEAFSLLCQKEGIIPALESSHALAYALKLA
QKCAQESIIVVNLSGRGDKDLSTVYNALKGGLK
NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt
atgaataaaaaagcgtattttggggagtttggagggagttttgtttcagaattgttagtg
cctgcattaagagagttagaacaggcgtttgatgcgtgtttgaaagatgaaaaattccaa
aaagaatattttcatcttttaaaagattttgtgggccgtcctagccctttaaccctgtgt
caaaatatcgtttctaaccctaaagtcaagctttatttaaaacgagaagatttaatccat
ggcggggcgcacaagactaatcaggctttagggcaagcccttttagcgaaaaaaatgggg
aaaacaaggatcattgctgaaacaggcgctgggcagcatggcgttgcaacggctatcact
tgcgcgttattgggtttaaaatgcgtgatttttatgggaggcaaagacatcaagcgccag
gaaatgaatgtttttagaatgcgcttattgggtgctgaagtgagagaagtcaattcaggg
agcgcgacgcttaaagacgccgtgaatgaggctttaagagattgggcgagcagctataag
gacacgcattatttgctaggcacagccgccgggccgcacccttaccccacaatggttaaa
acctttcaaaaaatgataggcgatgaggttaaaagccaaattttagaacaagaaaaccgc
ttgcctgattatgtgatcgcatgcgttggaggggggtctaacgctatagggatattcagc
gcgtttttaaacgataaagaggtcaaactcataggcgtagagcctgccggattagggcta
gagactaataagcatggggcgactttgaataaggggcgtgtggggattttgcatgggaac
aaaacctatcttttacaagatgatgaaggccagattacagaaagccacagcattagcgcc
gggcttgattatccaggagtggggccagaacacagctatttaaaagggattgggcgtgcg
gtttatgaaagcgcaagcgatgctgaagcgctagaagccttcagtttgctatgccaaaaa
gaaggcattatcccagcgctagaaagctcacacgctttagcgtatgccttaaagctcgct
caaaaatgcgcacaagaaagtatcatcgtagtgaatttaagcggtcggggagataaggat
ttaagcaccgtttataacgctttaaaagggggtttaaaatga

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