KEGG   Helicobacter pylori Lithuania75: HPLT_07075
Entry
HPLT_07075        CDS       T01896                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hph  Helicobacter pylori Lithuania75
Pathway
hph03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPLT_07075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hph03019]
    HPLT_07075
Messenger RNA biogenesis [BR:hph03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPLT_07075
SSDB
Motif
Pfam: Lactamase_B RNase_J_C RMMBL Lactamase_B_2
Other DBs
NCBI-ProteinID: ADU83802
UniProt: E8QRP9
Position
complement(1401821..1403890)
AA seq 689 aa
MTDNNQNNENHENSSENSKADEARAGAFERFTNRKKRFRENAQKNAESSNHEVPSHHKKE
HRPNKKPNNHHKQKHAKTRNYAKEELDNNKVEGVTEILHVNERGTLGFHKELKKGVEANN
KIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEGLF
GVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKF
DEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKI
DHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRV
IMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVA
KYPDNEVLIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLN
FLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISC
GVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGV
FAATIFVNKNKQALLESSQFSSLGLVGFKDEKPLMKEIQGGLEVLLKSSNAETLNNPKKL
EDHTRNFIRKALFKKFRKYPAIICHVHAT
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgactgataacaaccaaaacaatgaaaaccatgaaaacagcagtgaaaattcaaaagct
gatgaggcacgagccggagcgtttgagcgcttcaccaaccgcaaaaagcgtttcagagaa
aacgcgcaaaagaacgcagagtcttcaaaccatgaagtgccttcgcaccataaaaaagag
catcgccccaacaaaaagccaaacaaccaccacaaacaaaaacatgccaaaacacgaaat
tacgccaaagaagaattggataacaacaaagtagagggcgttacggaaattttgcatgtg
aatgagagggggactttaggctttcataaggagttaaaaaagggcgttgaagcgaataac
aagatccaagtggagcatttaaacccgcattataagatgaatttaaactctaaagcgagc
gttaaaatcacgcctttagggggcttgggcgagattggggggaacatgatggtcattgaa
accccaaaaagtgcgatcgtgattgatgcgggcatgagcttccctaaagaagggcttttt
ggcgtggatattttaatcccggatttttcctatttgcaccaaatcaaggacaaaatcgcc
ggtattatcatcacccatgcccatgaagatcacataggggccacgccttatttgtttaaa
gagctgcaattccccctttatggaacgcccttgagtttagggctgattgggagcaagttt
gacgaacatggtttgaaaaaataccgctcgtattttaaaatcgtagaaaagcgttgcccc
attagcgtgggcgaatttatcattgaatggatccacatcacgcattctatcattgacagc
agcgctttagcgatccaaactaaagccggaaccatcatccacaccggcgattttaaaatc
gatcacaccccggtggataatttgcccacggatttgtatcgtttagcgcactatggcgaa
aagggcgtgatgcttcttttaagcgattccactaactcccataaatccggaaccacgccg
agtgaaagcaccatagcaccggcttttgataccctttttaaagaagcgcaagggagggtg
attatgagcaccttctctagcaatatccaccgggtgtatcaagccatacaatacggcatt
aaatacaaccgcaagatcgctgtgatcgggcgctctatggaaaaaaacctagacattgcc
agagaattaggctatatccatttgccttatcaatcttttattgaagccaatgaagtcgct
aaatacccggacaatgaagtcttaatcgtaacgaccggttcacaaggcgaaaccatgagc
gcgctttatcgcatggcgactgatgaacaccgccacatttctatcaaacccaacgattta
gtcatcatctccgctaaagccattcctggcaatgaagcgagcgtttcagcggtattgaat
ttcttgatcaaaaaagaagctaaagtggcttatcaagaatttgacaatatccatgtgagc
gggcatgccgcccaagaagagcaaaagctcatgttaagactcattaagcctaagtttttc
ttacccgtgcatggggagtataaccatgttgcgcgccacaagcaaaccgctatttcttgt
ggggtgcctgaaaaaaatatctatttaatggaagatggcgatcaagtggaagttggccct
gcgttcatcaaaaaagtaggcaccattaaaagcggtaaaagctatgtggataaccaaagc
aatttgagtattgacacaagcatcgtgcaacaaagagaagaagtcgctagcgctggggtg
tttgccgctacgatttttgtgaataaaaacaagcaagcgcttttagaaagctctcaattt
tccagtttagggcttgtgggctttaaagatgaaaagcctttgatgaaagaaattcaaggg
ggcttagaggtgttattaaaatccagcaacgccgaaactttgaataaccctaaaaaatta
gaagatcacactcgtaatttcatcagaaaagcgctctttaaaaagtttagaaaatacccg
gctattatttgtcatgtccatgctacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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