KEGG   Helicobacter pylori SJM180: HPSJM_03025
Entry
HPSJM_03025       CDS       T01323                                 
Name
(GenBank) penicillin-binding protein 1A
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
hpm  Helicobacter pylori SJM180
Pathway
hpm00550  Peptidoglycan biosynthesis
hpm01100  Metabolic pathways
hpm01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPSJM_03025
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    HPSJM_03025
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:hpm01003]
    HPSJM_03025
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpm01011]
    HPSJM_03025
Enzymes [BR:hpm01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     HPSJM_03025
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HPSJM_03025
Glycosyltransferases [BR:hpm01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   HPSJM_03025
Peptidoglycan biosynthesis and degradation proteins [BR:hpm01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   HPSJM_03025
SSDB
Motif
Pfam: Transgly Transpeptidase
Other DBs
NCBI-ProteinID: ADO02197
UniProt: E1PZ56
Position
complement(597263..599245)
AA seq 660 aa
MLKKIFYGFIVLFLIIIGLLAILIAQVWVTTDKDIAKIKDYRPGVASQILDRKGRLIANI
YDKEFRFYARFEEIPPRFIESLLAIEDTLFFEHGGINLDAIMRAMIKNAKSGRYTEGGST
LTQQLVKNMVLTREKTLTRKLKEAIISLRIEKVLSKEEILERYLNQTFFGHGYYGVKTAS
LGYFKKPLDKLTLKEIAMLVALPRAPSFYDPTKNLEFSLSRANDILRRLYSLGWISSNEL
KGALNEVPIVYNQTSTQNIAPYVVDEVLKQLDQLDGLKTQGYTIKLTIDLDYQRLALESL
RFGHQKILEKIAKEKPKTNASNDEDEDNLNASMIVTDTSTGKILALVGGIDYKKSAFNRA
TQAKRQFGSAIKPFVYQIAFDNGYSTTSKIPDTARNFENGNYSKNSAQNHAWHPSNYTRK
FLGLVTLQEALSHSLNLATINLSDQLGFEKIYQSLSDMGFKNLPKDLSIVLGSFAISPID
AAEKYSLFSNYGTMLKPMLIESITDQQNDVKTFTPMETKKITSKEQAFLTLSVLMNAVEN
GSGSLARIKGLEIAGKTGTSNNNVDAWFIGFTPTLQSVIWFGRDDNTPIGKGASGGVVSA
PVYSYFMRNILSIEPSLKRKFDVPKGLRKEIVDEIPYYSTPNSITPTPKRTDDSEERLLF
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgctaaaaaagattttttatggttttatcgttttatttttgattatcatagggttgtta
gccattcttatcgctcaagtttgggtaactacggataaggatattgctaaaattaaagat
tatcgcccgggcgtcgcttcacagattttagaccgaaaagggcgtttgatcgctaatatc
tatgataaggaatttcgtttttatgcgcgttttgaagaaatccccccacgatttattgaa
agccttttagcgatagaagacaccctcttttttgaacatggggggatcaatttagacgct
atcatgcgcgctatgattaaaaacgctaaaagcggtcgctacactgaagggggtagcacc
ctaacccaacaactcgttaaaaacatggtgctcacacgagaaaaaacattaaccagaaaa
ctcaaagaagccatcatttctttacgcattgaaaaagtcttaagcaaagaagaaatttta
gagcgctatttgaaccaaactttttttgggcatgggtattatggcgtgaaaaccgcaagt
ttagggtattttaaaaaaccccttgacaaactcacgcttaaagaaatcgccatgttagtc
gccttacccagagccccaagtttttatgaccctaccaaaaatttagaattttcactctct
agggctaatgatattttaaggcggttgtattctttaggctggatttcttctaacgagctc
aaaggcgctctcaatgaagtgccaatcgtctataaccaaacttccacgcaaaacatcgcc
ccttatgtcgtggatgaagtgttgaagcaattggatcaattagacgggctaaaaactcaa
ggctataccataaaactcacgatagatttggattaccaacgcttagcgttagagtctttg
cgttttgggcatcaaaaaatcttagaaaaaatcgctaaagagaagccaaaaactaacgcc
tctaatgatgaagatgaagacaacttaaacgctagcatgatagttacagatacgagcacc
ggtaagattttagccttagtgggggggattgattataaaaaaagcgctttcaatcgcgcc
acgcaagccaaacggcaatttgggagcgcgatcaagccctttgtgtatcaaatcgccttt
gataatggctactccacgacttctaaaatccctgataccgcgcgaaattttgaaaatggc
aattatagtaaaaacagcgcgcaaaaccacgcatggcaccctagcaattatactcgcaaa
tttttagggcttgtaaccttgcaagaagccttgagccattcgttaaatctggctacgatt
aatttaagcgatcagcttggctttgaaaaaatttatcaatctttaagcgacatggggttt
aaaaatctccctaaagatttgtctattgtgttagggagctttgctatctcgcccattgat
gcggctgaaaagtattctttattttctaattacggcaccatgctcaaacccatgctcatt
gaaagcattaccgatcaacaaaacgatgtcaaaactttcacgcctatggaaaccaaaaag
atcacctccaaagaacaggcttttttaaccctttcagtgctgatgaatgcggtagaaaat
ggctcagggagtttggctcgcattaaaggcttggaaattgccggtaaaaccgggacttct
aacaataatgtggatgcttggttcattggctttacccccaccttacaaagcgtgatctgg
tttgggagagacgataatacgcctattggcaaaggagcgtcaggaggcgttgtgagtgcg
cctgtgtattcgtatttcatgcgtaacattctaagcattgaaccttctttaaaaagaaag
tttgatgtccccaaaggattgcgtaaagaaatcgtggatgaaatcccctactactcaacc
cctaattccatcacccccacccccaaaagaacagacgatagcgaggaacgcttgttgttc
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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