KEGG   Helicobacter pylori SJM180: HPSJM_03350
Entry
HPSJM_03350       CDS       T01323                                 
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hpm  Helicobacter pylori SJM180
Pathway
hpm00970  Aminoacyl-tRNA biosynthesis
hpm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPSJM_03350 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpm03029]
    HPSJM_03350 (gatB)
Enzymes [BR:hpm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HPSJM_03350 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HPSJM_03350 (gatB)
Mitochondrial biogenesis [BR:hpm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPSJM_03350 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Other DBs
NCBI-ProteinID: ADO02262
UniProt: E1PZC1
Position
674732..676156
AA seq 474 aa
MPFEAVIGLEVHVQLNTKTKIFCSCSTSFGETPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEAHINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKDGTKIVRIER
AHMEEDAGKNIHEGSYSLVDLNRACTPLLEIVSKPDMRNSEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIERQSVAWENGRY
NEEVVQETRLFDTAKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPGA
KKIRYMKDFNLKEDDANLLVSDPLLAEYFESMLNLGVKAKTSVTWLCVELLGRLKAEITL
ENCGVSAHMLGVLAKRIDEGKISGKSAKDVLDRLLEEQGGDVDALIEQMGLSQVNDTEAI
VKVIEEVLKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPSVVNAILKEKLD
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgccatttgaagctgtaatcgggctagaagtccatgtccaactcaacaccaaaaccaaa
atcttttgctcttgctctacaagctttggagaaacccccaattctaacacctgccctgtg
tgtttgggcttaccgggagctttgccggtattgaataaagaggtggttaaaaaagccatc
caattaggcacagccattgaagctcatatcaaccagtattccatttttgcgaggaaaaat
tatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccccattgtg
agcgatgggaagttagagattgacactaaagatggcacaaaaatcgtgcgtattgaaagg
gcccacatggaagaagacgccggtaaaaatatccatgagggcagttattctttggtggat
ttgaaccgtgcttgcacccctttattagaaattgtcagcaagccggacatgcgaaatagt
gaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatttct
gatgcgaacatgcaagaggggaatttcaggtgcgatgcgaacgtgtccatcaggcccaaa
ggcgatgaaaagctttacacgagggtggaaatcaaaaacttaaatagctttagattcatc
gctaaagcgattgaatacgaaatagagcgccaaagcgtggcgtgggagaacgggcgctat
aatgaagaggtggttcaagaaacgcgcctttttgacaccgccaaagggatcaccctttct
atgcgcaataaagaagaatcagcggattaccgctattttaaagatccggatttgtatcct
gtttttattgatgaaaaacttttaaaagaagctcaaaagatcaatgaattgccgggtgcg
aaaaaaatccgctacatgaaagattttaaccttaaagaagacgatgcgaatttattggtg
agcgatcctttattggcagagtattttgaaagcatgcttaatcttggggttaaggctaaa
acgagcgtaacatggctttgcgtggaattattagggcgcttgaaagccgaaatcacttta
gaaaattgcggagttagcgctcacatgttaggcgttttagccaaacgcattgatgagggc
aagatttctggcaagagcgctaaagatgtgttagacaggcttttagaagagcaagggggc
gatgtggatgcgctcattgaacaaatgggcctatctcaagtcaatgacacagaagcgatt
gttaaagtcatagaagaggtgcttaaaaacaatgctgataaggtgcttgaatacaaaagc
ggtaaggacaagctttttggtttttttgtggggcaggcgatgaaaaatttaaaaggcgct
aatcctagcgtggtgaatgctattttgaaagagaaattggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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