KEGG   Helicobacter pylori 35A: HMPREF4655_20078
Entry
HMPREF4655_20078  CDS       T01892                                 
Symbol
serS
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF4655_20078 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hpo01007]
    HMPREF4655_20078 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpo03016]
    HMPREF4655_20078 (serS)
Enzymes [BR:hpo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     HMPREF4655_20078 (serS)
Amino acid related enzymes [BR:hpo01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   HMPREF4655_20078 (serS)
Transfer RNA biogenesis [BR:hpo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HMPREF4655_20078 (serS)
 Prokaryotic type
    HMPREF4655_20078 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N Surfac_D-trimer
Other DBs
NCBI-ProteinID: ADU40248
Position
complement(70052..71299)
AA seq 415 aa
MIDRKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF
GIKMAQKVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEE
DNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIH
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY
NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAIVHPKESDAMQE
HMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgattgatagaaaacttttattgcaagattttgagatggtggctctttctttaaaaaag
cgtaataatgcgatggatgatgaattggagcgcttgcgcgaagtcatcacgcattataaa
aagcaactcattgaattagaaagcttgcaagcctttcaaaacaaggtttctaaagaattt
ggtatcaaaatggctcaaaaagtggatacaagcgatctcaaaaaagagctagaaaacaat
aaaatcaaactgaatgagctttccaaaagcgtgggcgaattggaacaacaaatagattta
aagctttcaataatccctaatctggtggatgaaaaaacccctttaggcgcaagcgaagaa
gacaacatagaaatcaaaaaaatcttaacccctagaaatttcactttcaaacccaaagaa
cattttgaactcgctcaacaaaatggctggattgattttgaaagcggcgtgaaactcgct
aaaagccgtttttctgtcatcaggggttttggggctaaaatttatcgcgcgctcatccat
ttaatgttggattttaatgaaaaaaatggctttgaaatcatctatacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattgcccaaattcaaagaagatgttttcaaa
atagaaaatgaaaatttgtatctgatccctaccgctgaagtaacgctcaccaatctatac
aacgacacgattgttagcgttgaaaaactccctattaaaatgaccgcgcacacgccttgt
tttaggagcgaagcagggagtgcgggcaaggacacaagggggatgataagacagcaccag
tttgataaagtagagctagtggctatcgtgcaccctaaagaaagcgatgccatgcaagag
catatgctagagagcgcgagcgaaattttaaaggctttggaattaccgcaccggtttgtg
caattgtgcagcgcggatttaggctttagcgcaagcaacacgatagatattgaagtgtgg
ctacccgggcaaaattgctacagagaaatcagctcggtgtctaacacgagggattttcaa
gccaggcgcgcgaaaatccgcttcaaagaaaatcaaaaaaaccaattagcgcacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcatccatattcctaaggcgttagaaaaatacctttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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