KEGG   Helicobacter pylori 35A: HMPREF4655_20453
Entry
HMPREF4655_20453  CDS       T01892                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo00300  Lysine biosynthesis
hpo01100  Metabolic pathways
hpo01120  Microbial metabolism in diverse environments
hpo01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HMPREF4655_20453 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hpo01002]
    HMPREF4655_20453 (dapE)
Enzymes [BR:hpo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     HMPREF4655_20453 (dapE)
Peptidases and inhibitors [BR:hpo01002]
 Metallo peptidases
  Family M20
   HMPREF4655_20453 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer
Other DBs
NCBI-ProteinID: ADU40590
Position
complement(440079..441296)
AA seq 405 aa
MFCIYTSICEKTLKGFLMNALEITQKLISYPTITPKECGIFEYIKSLFPTFKTLECGENG
VKNLFLYRIFNPPKEHTEEKHAKKEHAKENIKPLHFCFAGHIDVVPPGNNWQSDPFKPII
KEGFLYGRGAQDMKGGVGAFLSASLNFNPKTPFMLSILLTSDEEGQGIFGTRLMLEKLKE
KDLLPHMAVVAEPTCEKVLGDSIKIGRRGSINGKLILKGTQGHAAYPQKCQNPIDTLASV
LPLISGVHLDDGDEYFDPSKLVITNLHAGLGANNVTPASVEIIFNARHSLKTTKESLKKY
LEKVLKSAPYTLELESSSSPFITASHSKLASVLKENILKTCYATPLLNTKGGTSDARFFS
AHGIEVVEFGVINDRIHAIDERVSLKELELLEKVFFGVLENLSEK
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgttttgcatttatacatccatttgcgaaaaaactcttaaaggatttttaatgaacgct
ttagaaatcacccaaaagctcatcagctaccccaccatcacgcccaaagaatgcggtatt
tttgaatacattaaatcgctttttcctacttttaaaactctagagtgtggggaaaatggc
gtgaaaaacctttttttataccgcatttttaacccccctaaagagcatacagaagaaaag
catgcaaaaaaagagcatgcaaaagaaaatattaagcccttgcatttttgctttgcaggg
catattgatgtcgtgcctcctggaaataactggcaaagcgatccctttaaacccattatt
aaagaggggtttttatacggccgtggggctcaagacatgaaagggggcgtgggggcgttt
ttgagcgcgagtttgaattttaaccctaaaacccctttcatgctttctattttgctcaca
agcgatgaagaagggcaagggatttttggcactaggcttatgttagaaaaactcaaagaa
aaagatttgctccctcacatggcggttgtggctgaacccacttgcgaaaaagtcctaggc
gatagcatcaaaattggccgaagaggctccattaatggcaaactcattttaaaaggcact
caagggcatgcggcttacccgcaaaaatgccaaaaccccattgatacgctcgcttctgtt
ttgcccttgatttcaggagtccatttagacgatggcgatgaatattttgacccttcaaaa
ttggttatcaccaacttgcatgcagggttaggagcgaataatgtaacgcccgcaagcgta
gaaattatttttaatgcgcgccattctttaaaaaccaccaaagaaagtttgaaaaaatat
ttagaaaaagttttaaaaagcgctccttacactttagaattagaatcaagcagttcgcct
ttcatcacggcttcccattcaaagcttgctagcgttttaaaagaaaatattttaaagaca
tgctatgccaccccccttttaaacaccaaaggcggcacgagcgatgcgcgattttttagc
gctcatggcatagaagtggtagaatttggcgtcattaatgataggattcatgccattgat
gaaagggtgagcttgaaagaattagagcttttagaaaaagtgttttttggggttttagag
aatttaagcgagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system