KEGG   Helicobacter pylori 35A: HMPREF4655_20503
Entry
HMPREF4655_20503  CDS       T01892                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HMPREF4655_20503 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpo03400]
    HMPREF4655_20503 (xseA)
Enzymes [BR:hpo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HMPREF4655_20503 (xseA)
DNA repair and recombination proteins [BR:hpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HMPREF4655_20503 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Viral_P18 SSB DUF6645
Other DBs
NCBI-ProteinID: ADU40636
Position
489061..490323
AA seq 420 aa
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTTHKVSGHAYFSLKDSQSVIRCVLFKG
NANRLKFALKEGQEVVVFGGISTYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSV
VESIAYADSFHNTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTERL
NRLENALKLAHANLKLPQFGAFVSKNNQAIGLEALKRGDKIELSNEKARASATILSVDRV
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtggatgtattgagcgtgagcgaaatcaatgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgactacccataaggtgagcggc
catgcgtatttttcgctcaaagacagccagtcagtcatcaggtgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggc
attagcacgtatgttccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gatataggttcattaaccctagctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgatgaagccaataaattacccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgaaaaagatcgcttccaaacgatggccg
atgtgcgaattagtttgcatcaatgcgttaatgcaaggggagggctgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagctttcataacacaaaaaacgcttttgatgcgatt
gtggtggctaggggtggggggagcatggaggatttgtattctttcaatgatgagaaaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttagtagcggatttaagggcttctacgccttcaaacgcaatggaa
attttactccctaatagcgatgaatggcggcaaagacttgatgggtttaatgtgaaattg
caccgctcttttaaaattttgctccatcaaaaaaaggcgcatttagagcatttagaggct
tctttaaaacgattgagttttgaaaacaagcaccatttaaacgctctaaagctagaaaaa
ctaaaaatcgctctagaaaataaaaccctagaatttttacgctttaaaaaaacgctttta
gaaaaaatctctactcaaacattaacaagcccttttttacaaactaaaacagagcgatta
aacaggctagaaaacgcccttaaactcgctcatgcaaatttgaaattgccccaatttggg
gcgtttgtgagcaaaaataaccaagcgataggattagaggcattaaaaaggggcgataaa
attgaattgagcaatgaaaaagccagagcgagtgctactattttaagcgtggatagggtg
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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