KEGG   Helicobacter pylori 2017: hp2017_1369
Entry
hp2017_1369       CDS       T01913                                 
Name
(GenBank) putative ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hpq  Helicobacter pylori 2017
Pathway
hpq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    hp2017_1369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpq03019]
    hp2017_1369
Messenger RNA biogenesis [BR:hpq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     hp2017_1369
SSDB
Motif
Pfam: Lactamase_B RMMBL RNase_J_C Lactamase_B_2
Other DBs
NCBI-ProteinID: ADZ50488
Position
1373150..1375237
AA seq 695 aa
MTDNNHYENNNENNENSSENSKDHHEARAGAFERFTNRKKRFRENAQKNAESSNHEAPSH
HKKEHRPNKKPNNHHKQKHASQKTRNYAKEELDNNKVEGVTEILHVNERGTLGFHKELKK
GVEANNKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSF
PKEGLFGVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLG
LIGSKFDEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIH
TGDFKIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFK
EAQGRVIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFI
EANEVAKYPDNEVLIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEAS
VSAVLNFLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHK
QTAIACGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTNIVQQREE
VASAGVFAATIFVNKNKQTLLESSQFSSLGLVGFKDEKHLVKEIQGGLEVLLKSSNAEIL
NNPKKLEDHTRNFIRKALFKKFRKYPAIICHVHSF
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgactgataacaaccattatgaaaataataatgaaaacaacgaaaacagcagtgaaaat
tcaaaagatcaccatgaggcacgagccggagcgtttgagcgattcaccaaccgcaaaaag
cgtttcagagaaaacgcgcaaaaaaacgcagagtcttcaaaccatgaagcgccttcgcac
cataaaaaagagcatcgccccaacaaaaagccaaacaaccaccacaaacaaaaacatgcc
tcccaaaaaacacgaaattacgccaaagaagaattggataacaacaaagtagagggcgtt
acggaaattttgcatgtgaatgagagagggactttaggctttcataaggaactcaaaaaa
ggcgttgaagcgaataacaagatccaagtggagcatttaaaccctcattataagatgaat
ttaaactctaaagcgagcgttaagatcacgcctttagggggcttgggcgagattgggggg
aacatgatggtcattgaaaccccaaaaagcgcgatcgtgattgatgcgggcatgagtttc
cctaaagaggggctttttggcgtggatattttaatcccggatttttcctacttgcaccaa
atcaaggacaaaatcgccggtattattatcacccatgcccatgaagatcacataggggcc
acgccttatttgtttaaagagttgcaattccccctttatggcacgcctttgagtttgggg
ctgattgggagcaagtttgacgaacatggtttgaaaaaataccgctcgtattttaaaatc
gtagaaaagcgttgccctattagcgtgggcgaatttatcattgaatggatccacatcacg
cattctattattgacagcagcgctttagcgatccaaactaaagccggaacgatcatccac
accggcgattttaaaatcgatcacactccagtggataatttgcccacggatttgtatcgt
ttagcgcactatggcgaaaagggggtgatgcttcttttaagcgattccacgaactcccat
aaatccgggaccacgccgagtgaaagcaccatagcgccggcttttgataccctttttaaa
gaagcgcaagggagggtgattatgagcaccttctctagcaatatccaccgggtttatcaa
gccatacaatacggcatcaaatacaaccgcaagatcgctgtgatcgggcgctctatggaa
aaaaacctagacatcgctagagaattgggctatatccatttgccttatcaatcttttatt
gaagccaatgaagtcgctaaatacccggacaatgaagtcttaatcgtaacgaccggctca
caaggcgaaaccatgagcgcgctttatcgcatggcgaccgatgagcaccgccacatttct
atcaaacccaacgatttagtcatcatttccgctaaagccattcctggcaatgaagcgagc
gtttcagcggtgttgaatttcttgatcaaaaaagaagctaaagtggcttatcaagaattt
gacaatatccatgtgagcgggcatgccgcccaagaagagcaaaagctcatgctaagactc
attaagcctaagtttttcttacccgtgcatggggaatataaccatgtcgcacgccacaaa
caaaccgctattgcttgcggggtgcctgaaaaaaatatctatttaatggaagatggtgat
caggtggaagttggccctgcgttcatcaaaaaagtcggcacgattaaaagcggtaaaagc
tatgtggataaccaaagcaatttgagtattgacacaaacatcgtgcagcaaagagaagaa
gtcgctagcgctggggtgtttgcggctacgatctttgtgaataaaaacaaacaaacactt
ttagaaagctctcaattttccagtttagggcttgtgggtttcaaagatgaaaagcatttg
gttaaagaaattcaaggaggcttagaggtgttactgaaatccagcaacgccgaaattttg
aataaccctaaaaaattagaagatcacactcgtaatttcatcagaaaagcgctctttaaa
aagtttagaaaatacccggctatcatttgtcatgtccattctttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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