KEGG   Helicobacter pylori v225d: HPV225_1073
Entry
HPV225_1073       CDS       T01899                                 
Symbol
ubiD
Name
(GenBank) UbiD family decarboxylase
  KO
K03182  4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
Organism
hpv  Helicobacter pylori v225d
Pathway
hpv00130  Ubiquinone and other terpenoid-quinone biosynthesis
hpv01100  Metabolic pathways
hpv01110  Biosynthesis of secondary metabolites
hpv01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hpv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    HPV225_1073 (ubiD)
Enzymes [BR:hpv01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.98  4-hydroxy-3-polyprenylbenzoate decarboxylase
     HPV225_1073 (ubiD)
SSDB
Motif
Pfam: UbiD UbiD_C UbiD_N
Other DBs
NCBI-ProteinID: ADI35121
Position
1060287..1062161
AA seq 624 aa
MRDFLKLLKEHNELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTF
SMPVLMNAFGSFKRLELLLKTPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFP
KKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGPFITMGQVYTQSLDHKKKNLGMYRLQV
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
GFMRGKKAHMMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLE
VKTISYKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNL
ILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYVLENFSKEK
ILISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDNALLALLQDKMPNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIV
NNIDAQRDILTSKHCFFIDATNKGIMDKHFREWPTETNCSMEVIEGLKKKGLLKDFETLN
QKFHLTHSFSTHKEDSIKKSYDRL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgcgagattttttaaagcttttaaaagagcataatgaattagaagtcattgacaccccc
cttgaagtggatttagaaatcgctcatctagcctatatagaagcgaaaaagcctaatggg
ggcaaagcccttttattcacgcaacccataagaaaagaacatgaccaaatcaaaaccttt
agcatgcctgttctaatgaacgcttttggctctttcaaacgcttggagcttttattaaaa
acccccatagaaagtttgcaacaacgcatgcaagcgttcttgcactttaacgctcctaaa
aatttcactgagggtttgaaagtcttaaaagatttatgggatttaagacacattttccct
aaaaaaaccactcgccctaaagatctcattatcaagcaagacaaagaagttaatttgttg
gatctgcccgttttaaaaacttgggaaaaagatggcgggccttttatcactatggggcaa
gtctatacccaaagcctggatcataaaaaaaagaatttaggcatgtatcgtttgcaagtt
tatgataaaaaccatttaggcttgcactggcaaatccataaagactcccaactctttttc
cacgaatacgctaaggctaaagtcaaaatgcctgtcagtatcgctattggtggggatttg
ctctacacatggtgcgcgacagcccccttaccttatggggtttatgaactcatgctctat
gggtttatgagaggaaaaaaagcacacatgatgccatgtttgagtaattctttgagcgtg
ccaagggattgcgatattgtgatagaagggtttgtggattgcgaaaagttagagcttgaa
gggccttttggggatcacacgggctattatacccccattgaaccctaccctgttttagaa
gtcaaaactattagctataaaaaagattccatttacttagccactgtggtgggtaagccc
cctttagaagacaaatacatggggtatttgactgaacgcttgttcttgcccttgcttcaa
atgaacgcccccaatctcatagattattacatgccagaaaatggggtgtttcataatttg
attttagccaaaatacacacgcgctataacgctcatgccaaacaagtcatgcatgctttt
tggggtgtggggcagatgagttttgttaaacatgcgatttttgtcaatgaagacgctccc
aatctaagagacaccaacgctatcattgagtatgtattagaaaatttttctaaagaaaaa
attctcatctctcaaggcatatgcgacgcattagatcatgcaagccctgaatacgctatg
ggggggaaactcggtattgatgcgacctctaaaagcaataccccctaccccacgctttta
aacgataacgctttattagcgcttttacaagataaaatgccaaatatcgttcttttgaag
caatattacccgcacacccgtaaccccatttgcgtaatcagcgtggaaaagaaagacaaa
agcgtcattgaattggctaaaaatttgctcggttttgaagaatatttacgcattgtcatc
tttgtagagcataccagcaacgatttaaacaacccttacatgctgttatggcgcatcgtt
aataatattgatgcgcaacgcgatattctcacctctaaacattgtttttttatagacgct
accaataagggcattatggataaacattttagagaatggcctacagaaaccaattgttcc
atggaagtcatagagggtttgaaaaagaaagggcttttaaaagattttgaaactttaaat
caaaaattccatctcacgcattcttttagcacgcataaagaagattctataaagaagagc
tatgacagattatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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