KEGG   Helicobacter pylori v225d: HPV225_1311Help
Entry
HPV225_1311       CDS       T01899                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
hpv  Helicobacter pylori v225d
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:hpv00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HPV225_1311 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HPV225_1311 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HPV225_1311 (trpA)
Enzymes [BR:hpv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HPV225_1311 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1288687..1289475)
Genome map
AA seq 262 aa AA seqDB search
MRYKNMFETLKKQDKMAFIPFVTLGDPNYEWSFEIIKTLITSGVSALELGFAFSDPVADG
VTIQASHLRALKHASMAKNFQLLKKIRGYNHDIPIGLLAYANLIFSYGVDNFYAQIKECG
ADSVLIADMPLIEKELVLKSAQKYQIKQIFIASPNASNKDLEQAAMHSQGYIYTLARSGV
TGASRILENDASAIIKTLKTFSSTPALLGFGISKKEHIKNAKGMGADGVICGSALVKIIE
ENLNDENAMLEKIKGFIGEMIF
NT seq 789 nt NT seq  +upstreamnt  +downstreamnt
atgaggtataaaaacatgtttgaaaccttaaaaaaacaagacaaaatggcgtttatcccg
tttgtaaccttgggcgatcctaattatgaatggagttttgaaatcattaaaactttaatt
actagcggggtgagcgctttagaattggggtttgctttctcagacccggtagcggatggc
gttaccatacaagcgagccatttaagggcgttaaaacatgctagcatggctaaaaatttc
cagcttttaaaaaagattagaggctacaaccatgatattcccatagggcttttagcgtat
gcgaatctcattttttcttatggcgtggataatttttacgcccaaatcaaagaatgcggc
gcagatagcgttttaatagcggatatgcccctaatagaaaaagaattagtcctaaaatcc
gctcaaaaataccagattaaacaaatctttatcgccagccccaatgcgagtaataaagat
ttagaacaagccgctatgcattcgcaaggctatatctacactctggctaggagtggggtt
acaggagcgagccgtattttagaaaatgacgcgagcgctattattaaaaccttaaaaact
tttagttctaccccggccttattaggctttggcatttctaaaaaagaacacataaaaaac
gctaaaggcatgggcgctgatggcgtgatctgcggctcagcgttagtcaaaatcatagaa
gaaaatttgaacgatgaaaacgccatgctggaaaaaattaaagggtttataggagaaatg
attttttaa

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