KEGG H.pylori: HP0738

Helicobacter pylori 26695: HP0738

Entry

HP0738 CDS H.pylori

Gene name ddl

Definition D-alanyl-alanine synthetase A (EC:6.3.2.4)

Orthology K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]

Pathway hpy00473 D-Alanine metabolism
hpy00550 Peptidoglycan biosynthesis

Class Metabolism; Metabolism of Other Amino Acids; D-Alanine metabolism
[PATH:hpy00473]
Metabolism; Glycan Biosynthesis and Metabolism; Peptidoglycan
biosynthesis [PATH:hpy00550]

SSDB

Motif Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 RimK GARS_A Ycf54
VitD-bind_III
PROSITE: DALA_DALA_LIGASE_2 DALA_DALA_LIGASE_1 ATP_GRASP

Other DBs NCBI-GI: 15645358
NCBI-GeneID: 899019
JCVI-CMR: HP0738
UniProt: P56191

Structure

PDB: 2PVP

Position 792978..794021

AA seq 347 aa
MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDHVLLNEKNRANALDLMNFNFPFIIKPNNAGSSLG
VNVVKEEKELVYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIKNEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQIKNSYLLQIQKNK

NT seq 1044 nt +upstreamnt +downstreamnt
gtggagttttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaaggagtgttaaaagataggattaaatattttatttttttagatgaa
aaccatcatttttatttgattgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattacctcccctaatcctcacacacaatggcttgcttaaaaactcattt
ttaggtgctaagattatagaattgcctttagtgatcaatctcgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgctgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaagactttagatcatgttcttttgaatgaaaaaaaccgcgctaacgccttggat
ttgatgaactttaatttccctttcataatcaagcctaataacgccggaagctctttaggg
gtgaatgttgtgaaagaagaaaaagaattggtttacgctttagacggtgcgtttgaatat
tctaaagaggtcttgatagagcctttcattcagggagtgaaagaatacaatttggccggt
tgcaagatcaaaaaggatttttgtttttcctatgtggaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcgaatctt
tctaacgccctagaagagcaattaaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgatcattcgttgcgatttttttgtcataaaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaagatccaaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (10)   
   Pfam (7)   
   PROSITE (3)   
All databases (24)

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