KEGG   Helicobacter pylori Aklavik117: HPAKL117_01300
Entry
HPAKL117_01300    CDS       T02352                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hpya  Helicobacter pylori Aklavik117
Pathway
hpya03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPAKL117_01300 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpya03400]
    HPAKL117_01300 (xseA)
Enzymes [BR:hpya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HPAKL117_01300 (xseA)
DNA repair and recombination proteins [BR:hpya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HPAKL117_01300 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Viral_P18 SSB
Other DBs
NCBI-ProteinID: AFX90675
UniProt: K7Z3R0
Position
261079..262341
AA seq 420 aa
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSSHAYFSLKDSQSVIRCVLFKG
NANRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEAHKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSV
VESIAYADSFHGTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLEA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTERL
NALENALKLAHAHLKLPQFGAFVSKNNQAIELEALKRGDKIALSNEKARASATILSVDRV
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtggatgtattgagcgtgagcgaaatcaatgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgacgatccataaggtgagcagc
catgcgtatttttcgctcaaagacagccagtcagtcatcagatgcgtgttgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggc
attagcgcgtatgttccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gatataggttcattaaccctagctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgatgaagcccataaattgcccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgaaaaagatcgcttccaaacgatggccg
atgtgtgaattggtttgcatcaatgcgttaatgcaaggggagggttgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagctttcatggcacaaaaaacgcttttgatgcgatt
gtggtggctaggggtggggggagcatggaggatttgtattctttcaatgatgagaaaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttggtagcggatttaagggcttctacgccttcaaacgcgatggag
attttactccctagcagcgatgaatggttgcaaagacttgatgggtttaatgtgaaattg
caccgctcttttaaaattttgctccatcaaaaaaaggcgcatttagagcatttagaggct
tctttaaaacgattgagttttgaaaacaagcaccatttaaacgctttaaaactagagaaa
ttaaaaatcgctttagaaaataaaaccctagaatttttacgctttaaaaaaacgctttta
gaaaaaatctctactcaaacattaacaagcccttttttacaaactaaaacagagcgattg
aacgcactagaaaacgcccttaaactcgctcatgcacatttgaaattgccccaattcggg
gcgtttgtgagcaaaaataaccaagcgatagaattagaggcattaaaaaggggcgataaa
attgcattgagcaatgaaaaagccagagcgagcgctactattttaagcgtggatagggtg
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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