KEGG   Helicobacter pylori oki898: HPOKI898_07740
Entry
HPOKI898_07740    CDS       T03729                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
hpyj  Helicobacter pylori oki898
Pathway
hpyj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hpyj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPOKI898_07740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpyj03400]
    HPOKI898_07740
Enzymes [BR:hpyj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HPOKI898_07740
DNA repair and recombination proteins [BR:hpyj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HPOKI898_07740
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 T2SSM_b
Other DBs
NCBI-ProteinID: AHN45556
Position
complement(1547919..1548671)
AA seq 250 aa
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGYFDFWNCAIKK
GYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYVPNSQQALSRLSYRM
SWEVEFRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNA
GFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSHPLKTRLKDALIYKDILGS
DHCPVGLELV
NT seq 753 nt   +upstreamnt  +downstreamnt
atgaaattgatttcatggaatgtgaacgggttaagagcttgcatgactaagggctttatg
gattttttcaacagcgttgatgcggatgttttttgcattcaagaatctaaaatgcaacaa
gaacaaaacacctttgagtttaaagggtattttgatttttggaattgcgcgattaaaaaa
ggctattctggggtggtaactttcactaaaaaagagcctttaagcgtgagctatggtatc
aatatagaagagcatgacaaagaggggcgcgtaataacttgcgaatttgagtccttttat
ttagtgaatgtttatgtccctaattcccaacaagccctatccaggcttagttatcgcatg
agttgggaagtggaatttagaaaatttttaaaagctttagagttaaaaaaacctgtcatt
gtgtgcggggatttgaatgtggcccacaatgaaattgatttagaaaaccctaaaacaaac
cgaaaaaatgcgggctttagcgatgaagagagagagaaatttaacgagcttttgaacgcc
ggttttattgacactttccgttatttttaccctaacaaagaaaaggcttacacctggtgg
agttacatgcaacaagcaagggataaagacattggttggcgcattgattattttctatgc
tctcatcctttaaaaacgcgcttaaaagacgctttaatctataaagatattttagggagc
gatcattgcccggtggggttggaattagtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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