KEGG   Helicobacter pylori 52: HPKB_0192
Entry
HPKB_0192         CDS       T01898                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
hpz  Helicobacter pylori 52
Pathway
hpz00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hpz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPKB_0192 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hpz01007]
    HPKB_0192 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpz03016]
    HPKB_0192 (lysS)
Enzymes [BR:hpz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HPKB_0192 (lysS)
Amino acid related enzymes [BR:hpz01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HPKB_0192 (lysS)
Transfer RNA biogenesis [BR:hpz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HPKB_0192 (lysS)
 Prokaryotic type
   Other AARSs
    HPKB_0192 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ACX98811
Position
193996..195501
AA seq 501 aa
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESI
VGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKI
IYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQGIKVEPNLTYGKLLA
EAFDHFAEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESEE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgttttccaaccaatacatccaacaacgcatccataaagccaacagcttgagggaagaa
gggaaaaacccttataaaaatggcttgaaacgaagcctcacaaacgccgcttttttagaa
aaatacgcttatgttaagggtttagaagagcctaaagacaaggaaaaatgcgagagtatt
gtagggagggtcaagcttttgcgtctaatgggtaaggcatgttttattaaaattgaagat
gaaagcgcgattttgcaagcttatgtttcgcaaaatgaattgaacgatgaatttaaaagc
ctgaaaaagcatttagaagtgggcgatattgtgttggtgaaaggttttccttttgctacc
aaaaccggtgaattaagcgttcatgccctagaatttcatattttaagcaaaaccattgtg
cctttacctgaaaaattccatggactgagcgatatagaattgcgttaccgccagcgctac
ttggatttgatagtcaatcctagcgttaaagatgtgtttaaaaaacgcagtttgattgtt
tctagcgtgcggaaattctttgaaacggaagggtttttagaagtggaaacccccatgatg
caccccattcctggcggggcgaacgcaaggccttttatcacttaccataacgctttagaa
attgaaaggtatttaagaatcgctccagaattatacctcaaacgcttgattgtggggggt
tttgaagcggtgtttgaaatcaatcgtaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatctgatt
gaactcagcaagaggctatttgactacttgctaaagactttgaacttaccttcaaaaatc
atttataacgatatggaagtggattttaaccaaacgagcgtgatttcttatttggacgct
ttagaaacaatagggggcattagtaaggatattttagaaaaagaagacaggcttttggct
tatttgttagagcaaggcatcaaagtagagccaaatctcacttatggtaaattgctcgct
gaagcgtttgatcattttgcagagcaccaactcatcaaccccacttttgtaacccaatac
cccattgagattagccccctagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgtttattgcagggaaagaaatcgctaacggctttagcgagttgaacgatcct
ttagatcagttagaacgctttaaaaatcaagtggctgagaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattacgtgtgggcgttagcccatggaatgccccccactgca
gggcaaggcataggcattgatagattagtgatgctactcactggagctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgtggagagtgaa
gaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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