KEGG   Herbaspirillum rubrisubalbicans: Hrubri_3194
Entry
Hrubri_3194       CDS       T04238                                 
Symbol
dppD1
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hrubri_3194 (dppD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hrb02000]
    Hrubri_3194 (dppD1)
Transporters [BR:hrb02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Hrubri_3194 (dppD1)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_22 SMC_N Mg_chelatase nSTAND1 AAA_16 AAA_5 ABC_ATPase
Other DBs
NCBI-ProteinID: ALU90355
UniProt: A0A0U3LL81
Position
complement(3729376..3730380)
AA seq 334 aa
MSVLLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPR
KAQCSADHILFDGADLNGMSEKQRMQLRGKRMSMIFQEPMTSLNPSYTLGNQLCEAMLQQ
PGVTRGEARERALYLLHRTGIANAEDRLRQYPHQLSGGLRQRVMIAMSLMCSPDLIIADE
PTTALDVTIQAQILRMIRELQQEFGTAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVA
QLFAQPRHPYTRGLLNCIPVRGKTLPGSRLQAIPGVVPSLVGQVSGCAFRNRCALADGAC
ESDPPMMQQGPRNAPHQARCCKLDVPVSEMEVAA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgagtgtattgctggacgtgaagaacctgaaggtggacctacccaccgagaacggcatg
ttgcacgccgtgcgcggcatcgatttccaggtgcggcgtggagagatgctctgcctggtc
ggcgagtccggctgcggcaagtccatgacttcgttggccctgatgggattgctgccgcgc
aaggcgcaatgcagtgccgaccatattctgttcgacggcgccgatctgaatggcatgagc
gaaaagcagcggatgcaattgcgcggcaagcgcatgtcgatgatctttcaggagccgatg
acctcgctcaatccctcctacacgctgggcaatcaactctgcgaggccatgttgcagcaa
cccggcgtgacccgtggcgaagcgcgcgagcgcgcactctacctgttgcatcgcaccggc
attgccaatgccgaagaccgcctgcgccagtatccgcaccagctctcgggcggcctgcgc
cagcgcgtgatgatcgccatgtcgctcatgtgcagtcccgacctgatcatcgccgatgaa
cccaccaccgccctggacgtgaccatccaggcccagatcctgcgcatgatccgcgaactg
caacaggagttcggtaccgccgtcatcttcatcactcacgacctgggcgtggtctcgcgc
atcgccgaccgggtggcggtgatgtatgcggggcaggtggtggaaaccaccgatgtggcg
caactgttcgcccagccgcgccatccctacacgcgcggcttgctcaactgcattccggtg
cgtggcaagacgttgccgggcagccgcctgcaagccattcccggcgtggtgcccagcctg
gtgggccaggtcagcggctgcgccttccgcaatcgctgcgcgctggccgatggtgcttgc
gagagcgatccgcccatgatgcagcagggtcctcgcaacgcgccgcaccaggcgcgctgc
tgcaagctggatgttccggtttccgagatggaggtggcagcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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