KEGG   Herbaspirillum rubrisubalbicans: Hrubri_3548
Entry
Hrubri_3548       CDS       T04238                                 
Symbol
ubiD
Name
(GenBank) 3-polyprenyl-4-hydroxybenzoate decarboxylase
  KO
K03182  4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb00130  Ubiquinone and other terpenoid-quinone biosynthesis
hrb01100  Metabolic pathways
hrb01110  Biosynthesis of secondary metabolites
hrb01240  Biosynthesis of cofactors
Module
hrb_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    Hrubri_3548 (ubiD)
Enzymes [BR:hrb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.98  4-hydroxy-3-polyprenylbenzoate decarboxylase
     Hrubri_3548 (ubiD)
SSDB
Motif
Pfam: UbiD UbiD_C UbiD_N
Other DBs
NCBI-ProteinID: ALU90705
UniProt: A0A0U3K7V6
Position
complement(4170899..4172383)
AA seq 494 aa
MKYTDLRDFISKLQQKGELKRVSHPVSSRLEMTEIADRTLRAEGPALLFEQVDQKNIPVL
ANLFGTPHRVALGMGAQSISELRRIGHLLARLKEPEPPKGIKDVLDLGGLVKSLWDMAPK
ERSSAPCQDVVWEGQDVDLSRLPIQHCWPGDIAPLITWGLVITKGPHKKRQNLGIYRQQV
LGPNKVIMRWLAHRGGALDFREHCIAHPGQPYPVVVALGADPATILGAVTPVPDSLSEYQ
FAGLLRGSRTELVKAMGSDLRVPASAEIVLEGHIYPDEHHASGFEHALEGPYGDHTGYYN
EQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYL
PPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEVIWA
ITTRVDPVRDTVLVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETNREWGTPIVMSDE
VKKRVDTIWKDLGI
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaaatacaccgatttacgagattttatttccaaattgcaacaaaaaggagagctgaaa
cgcgtctcgcatccggtttcgtcccgtctggaaatgactgaaattgccgatcgcaccctg
cgggccgaaggtccggcgcttctttttgagcaggtcgaccagaaaaatatccccgttctc
gcgaatcttttcggtactccccatcgtgtggccctgggtatgggggcgcaaagcatcagt
gagttgcgtcgcatcggccatctgctggcccgcctgaaggagccggaaccgcccaagggc
atcaaggatgtgctggacctgggcgggctggtgaagtcgctgtgggacatggcacccaag
gagcgtagctcagcaccctgccaggatgtggtgtgggagggccaggacgtggacttgtcg
cgcctgccgatccagcactgctggccgggcgacatcgctccgttgatcacctggggtctg
gtcatcaccaaggggccgcacaagaaacgccagaatctgggcatctatcgccaacaggtg
ctgggccccaacaaggtcatcatgcgctggctagcccatcggggcggggcgctggatttc
cgcgagcactgcatcgcccatccgggccagccttatccggtggtggtggcattgggtgcc
gatccggccactatattaggagcggtcacgccggtgcccgatagtttgtccgaataccag
ttcgctggtctcttgcgcggcagtcgcaccgaactggtcaaggccatgggtagcgacttg
cgggtaccggcctcggccgagatcgtgctggaagggcatatctacccggatgaacatcat
gcctccggtttcgagcacgcgctggaaggtccgtatggcgaccacaccggttattacaat
gaacaggactggttcccggtcttcaccattgaccgcatcaccatgcggcgcgatgccatc
tatcactccacctacaccggcaagccgcccgatgagccggcggtgctgggtgtggcgttg
aatgaagttttcgtccccttgctgcagaagcagtttgccgaaatcactgatttctacttg
cctccagagggatgcagctatcgcatggcggtagtgcagatgaagaaatcttacgccggc
cacgccaagcgggtgatgttcggggtctggagtttcctgcgccagttcatgtacaccaag
ttcatcgtggtggtggatgaggatgtcgacatccgcgactggaaggaagtgatctgggcc
atcaccacccgggtggatccggtgcgcgatacggtgctggtggataacacgcccatcgat
tacctggacttcgcctcgcccatcagcgggctgggcagcaagatgggtatcgacgccacc
aacaagtggcccggtgaaaccaatcgcgaatggggtacgcccatcgtcatgagcgatgag
gtgaaaaaacgcgtcgataccatctggaaggatctggggatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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