KEGG   Helobdella robusta: HELRODRAFT_102185
Entry
HELRODRAFT_102185 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
hro  Helobdella robusta
Pathway
hro03022  Basal transcription factors
hro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HELRODRAFT_102185
  09124 Replication and repair
   03420 Nucleotide excision repair
    HELRODRAFT_102185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hro03021]
    HELRODRAFT_102185
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_102185
Transcription machinery [BR:hro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HELRODRAFT_102185
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HELRODRAFT_102185
SSDB
Motif
Pfam: BSD PH_TFIIH Voldacs
Other DBs
NCBI-GeneID: 20194539
NCBI-ProteinID: XP_009024736
JGI: Helro1_102185
UniProt: T1ED87
Position
Unknown
AA seq 578 aa
MAKSLEDVLLNITHVKNKKCDGTLYLLTERLAWMPSGKDSFTISYNYSDIKVQKISPDKK
EKIQLQIVLHSSGASTFHFNNPGGRSAQLKDRESVKDLLQQMLVKFKRKINGDLEEKHKM
LQEDPELFQMYKNLVVGNVLTPEEFWSDRLKSNKLIDSSAQNIGVSAGFLADIQGTAEGC
NGIRYNLTPDVIDNIFKTYPAVEQKHLEYVPDKLTEQEFWYEFFQSHYFHRDRINISDKE
LFADCAKNDEKILRSEIETEKSGNRMDLQSLIETSSDEYYGEDYFPEKEPGSISSANISL
IRRFNQHSTLVLKSIDTPQNSSNNNNKSSDVLGVAVEKKVTRDINNVDGVVERSNGKKNG
TKRASPSSSSSVASELELLTGNIDDDVIGSRDVNVTSMTSLNLTRVDAYMHGPVPEMALT
YNTSDELLAAAQAFHNDVISWKCNAAHQILPSNAGLNVLSELAPTGVLMQDSLGQQIDGI
VPNDSKHELKSMYMALSELLRHFWSCFPVTSRELDEKAARMDECLRKFQQTKLAPFSEKL
QTHQPDIDLTSHMNTMIEKAHTRFSTWQAKKLSRKPNI
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcaaaatctttggaggatgttttattgaacataacccatgtaaagaataaaaaatgt
gacggtaccctctacttgctaactgagcgactggcctggatgccatccggaaaagattca
ttcactatcagctacaattattctgatattaaagttcagaaaatttccccagataaaaaa
gaaaaaattcaacttcaaatagttcttcactctagtggggctagcacatttcattttaat
aacccgggtggccgatctgctcaattaaaagatcgtgaatctgtcaaggatctactccag
caaatgctcgttaagtttaaaaggaaaattaatggcgatttagaagagaaacataaaatg
ttgcaagaggaccccgagttgtttcaaatgtataaaaatttagtcgtcggcaacgttctc
acaccggaagaattctggtctgatagactgaagagtaataagctgatagactcatcagca
caaaacattggtgtttcagctggctttttggcagatatccagggcacggcagaggggtgc
aatggcatcaggtacaacttaaccccagacgtgattgacaacatatttaagacttaccca
gccgttgaacagaagcacttggagtatgtacccgataagttgacagagcaggaattctgg
tatgagttctttcaatcgcactattttcacagagatcgcattaatatcagtgacaaagag
ttgtttgctgactgtgccaagaacgatgagaagattttgagatcagaaattgagacagaa
aaatcagggaatagaatggatctacagtcattaattgagacatcgtcagatgagtactat
ggagaggattatttccctgaaaaggagccaggctcaatatcatcggcaaacatttcacta
atccgacgattcaatcaacactcgactttggtgttgaaatcgatcgatactccccagaat
agtagtaataataataataaaagtagtgatgtgctgggtgtggctgtcgagaagaaagta
acgagagatattaataatgtagatggtgttgttgagaggagtaatggcaaaaagaacggt
acaaagagagcatcgccctcctcgtcatcatcggtggcgtcagagttagaacttttaacc
ggcaacatcgacgatgacgtcatcggcagccgtgacgtcaacgtgacgtcgatgactagt
ttaaatctaacaagagttgacgcctacatgcatggacccgtgccagagatggcgctaacc
tacaacaccagcgacgagctactagctgccgctcaggctttccataatgacgtcatttcg
tggaagtgtaatgctgcacatcagatcctgcctagtaatgcgggcctgaatgtcctcagt
gaactggccccaactggagtacttatgcaagattctctcggccaacagattgatggtata
gtacctaatgattcaaaacacgaattgaagagtatgtatatggctctttctgagttgcta
aggcatttctggtcctgctttcccgtgacatctcgagaactagatgagaaagctgctagg
atggatgaatgcttgagaaagtttcagcagaccaagttggcacctttttctgagaaacta
caaacacatcagccagatatcgatctaacaagccacatgaatacgatgatcgaaaaagcc
cacacaagattttcaacatggcaggcaaaaaagttatccagaaagccgaatatttga

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