KEGG   Helobdella robusta: HELRODRAFT_102273
Entry
HELRODRAFT_102273 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
hro  Helobdella robusta
Pathway
hro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HELRODRAFT_102273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_102273
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HELRODRAFT_102273
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HELRODRAFT_102273
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 20194543
NCBI-ProteinID: XP_009024896
JGI: Helro1_102273
UniProt: T1ED91
Position
Unknown
AA seq 212 aa
MTDTFKFVLPGEKICKFNDRLNLLEGVYVKDNVVRSSLAGRLVIEEVEDEDEDGNDDCDM
EKIKTIKKIIRVSSAKHGNFVPFIGALVSARVTRVTQRYCKCRITTVEKTKCREPFNGLL
RKEDVRDKERDKTDMFKCFRPGDYILARVISTNDTMHYLLSTAEGELGVVCAISEAGSLL
VPLSWTEMQCSSTNQKEHRKVARVQPQLLLVD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacggacacgttcaaatttgtgcttccaggcgagaagatttgtaaatttaatgacaga
ttaaatttgctagaaggagtttacgtgaaagacaacgtcgtccgaagcagcttggctggc
cgattagtgattgaggaagtggaggacgaggatgaagatggcaacgacgattgtgacatg
gaaaaaataaaaaccattaaaaaaataattagagtgtcgtctgccaagcacggaaacttt
gttccattcattggggctctagtctccgccagggtgaccagggtgacacaaagatactgc
aagtgcaggataacaaccgtcgagaagactaaatgtcgagaaccgttcaatggcctcctt
aggaaggaagatgtgagggataaagagagagataagaccgacatgttcaaatgcttcagg
cctggagattacatactggctcgtgtcatctcgacgaacgacaccatgcattatctgctc
tcaacagctgagggtgaactgggtgtcgtctgtgccatcagtgaagcaggcagtttattg
gttccattgagttggaccgagatgcaatgctcgtcgaccaatcagaaggaacataggaag
gtcgcccgtgttcaaccgcagctcttgcttgttgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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