KEGG   Helobdella robusta: HELRODRAFT_96415
Entry
HELRODRAFT_96415  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14409  protein SMG7
Organism
hro  Helobdella robusta
Pathway
hro03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HELRODRAFT_96415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_96415
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     HELRODRAFT_96415
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     HELRODRAFT_96415
SSDB
Motif
Pfam: EST1_DNA_bind EST1 Novirhabdo_Nv
Other DBs
NCBI-GeneID: 20217666
NCBI-ProteinID: XP_009030567
JGI: Helro1_96415
UniProt: T1G9B9
Position
Unknown
AA seq 518 aa
MSSIDLFKQAENLKLACNDTTKGPNEVWKSRQLLQEIYQTLLTTDLEFALDKKVEQDLWK
YTFKKQISSLQCQGKDNKQGNLRKGEVQAGLNLFLKAASGFYLQLLQELTCWWKMDTPFN
KQPYCIGIIKEYPPIRTSKKFAHLNSYMYICQDCLVHLGDISRYRDLIDQAQFYYKHAAR
LAPFNGQPYNQLAILEVQRGNKLSAVFYHMRGLALIHPFPVSEVNLMKFFNKISKDSYES
RQKLASNEWISFFLQFHATIFLNLDLNKSEIRLNKILSTFNNNLESTSGFSGLQLIQICA
INFYQCYCLAKRVATKSNDKKNAFNINQSGDSKKVSDVTGRSGCETDVTGRSGCQDHLVG
NDGDESRTLKVLLSEDARGCSGSTDGEVRSNRWGLEGEVEDMIDDSFVFDEVRNIPHHGD
HLDSTAHKERCVDARDVQYKKQLIMVTDLTVAILNQMLEKCCEAATTNEQNGCSEFNDFA
LETVFPSVKSCLEWLVINLEMLHDCTNVQTVGLWSANC
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgtcatccatcgatttattcaaacaagcagaaaatttaaaactagcatgcaatgataca
actaaaggaccaaatgaagtttggaaatcaaggcagctactccaggaaatctatcagact
ctcctaactacagatttagaatttgccttggataaaaaagttgaacaagacttatggaag
tatacattcaagaagcagatttcatcattgcaatgtcagggcaaggataacaagcaaggg
aatttaaggaagggtgaagtacaagcaggtttgaacttgttcctcaaggcagccagtgga
ttttatttgcagttgttgcaggagttgacatgttggtggaagatggacactccattcaac
aagcagccatactgcattggcatcataaaagagtacccaccaataaggactagtaagaag
tttgcccacctcaattcctacatgtacatttgtcaggattgtttggtccatcttggagac
atctcgaggtacagggacttgattgaccaggcccagttctactacaaacatgctgctaga
ttggcgcccttcaatggccagccgtacaatcagttggccatcttggaggttcaacgcggc
aacaagctgtcggctgttttctatcacatgagaggtcttgcccttatacatccatttcct
gtttcagaggtcaacctgatgaagttcttcaacaaaatatcaaaggacagctacgaaagc
aggcagaagctggccagcaacgagtggatttccttctttctgcagttccacgcaacgatt
tttcttaatttggatttgaacaaatcagagattcgactgaataaaattctctcaacattc
aacaacaacctcgaatcaacatcgggattctcaggcctgcaactcattcagatatgtgcc
atcaacttctaccaatgttactgcctggcaaagagggtagcaacaaaatctaacgataag
aagaatgcattcaacattaaccaatcaggtgacagcaagaaggtaagcgatgtcactgga
aggtctggttgcgagaccgatgtcactggaagatctggttgccaggatcatctcgttggc
aatgacggagatgaaagcagaactttgaaagttttgctctctgaggatgcacgaggctgt
agtggaagcactgatggtgaagtcagaagtaaccgttggggtctggaaggagaggtggag
gacatgattgatgacagttttgtttttgatgaggtacgaaacattcctcaccatggtgat
catttagattcaactgcgcataaggaacgttgtgttgatgcgagagatgtgcagtacaaa
aagcagttgatcatggtgacggatttgacagttgcaatattgaatcaaatgctcgagaag
tgctgtgaagctgcaactacaaatgaacagaatggctgcagtgaattcaacgacttcgca
cttgaaacagtttttccctctgttaagtcgtgtcttgaatggctggtcatcaaccttgaa
atgttgcacgactgcaccaacgtgcagactgttggactctggtctgcaaactgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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