KEGG T01001: 26025

Homo sapiens (human): 26025

Entry

26025 CDS T01001

Gene name

PCDHGA12, CDH21, FIB3, PCDH-GAMMA-A12

Definition

protocadherin gamma subfamily A, 12

Orthology

K16495

protocadherin gamma subfamily A

Organism

hsa Homo sapiens (human)

Class

SSDB

Motif

Pfam:

Cadherin Cadherin_2 ChitinaseA_N

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

5q31

AA seq 932 aa
MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA
ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE
VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL
IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP
AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT
ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS
PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI
TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD
CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH
KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV
SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK

NT seq 2799 nt +upstreamnt +downstreamnt
atgattcctgcgcgactgcaccgggactacaaagggcttgtcctgctgggaatcctcctg
gggactctgtgggagaccggatgcacccagatacgctattcagttccggaagagctggag
aaaggctctagggtgggcgacatctccagggacctggggctggagccccgggagctcgcg
gagcgcggagtccgcatcatccccagaggtaggacgcagcttttcgccctgaatccgcgc
agcggcagcttggtcacggcgggcaggatagaccgggaggagctctgtatgggggccatc
aagtgtcaattaaatctagacattctgatggaggataaagtgaaaatatatggagtagaa
gtagaagtaagggacattaacgacaatgcgccttactttcgtgaaagtgaattagaaata
aaaattagtgaaaatgcagccactgagatgcggttccctctaccccacgcctgggatccg
gatatcgggaagaactctctgcagagctacgagctcagcccgaacactcacttctccctc
atcgtgcaaaatggagccgacggtagtaagtaccccgaattggtgctgaaacgcgccctg
gaccgcgaagaaaaggctgctcaccacctggtccttacggcctccgacgggggcgacccg
gtgcgcacaggcaccgcgcgcatccgcgtgatggttctggatgcgaacgacaacgcacca
gcgtttgctcagcccgagtaccgcgcgagcgttccggagaatctggccttgggcacgcag
ctgcttgtagtcaacgctaccgaccctgacgaaggagtcaatgcggaagtgaggtattcc
ttccggtatgtggacgacaaggcggcccaagttttcaaactagattgtaattcagggaca
atatcaacaataggggagttggaccacgaggagtcaggattctaccagatggaagtgcaa
gcaatggataatgcaggatattctgcgcgagccaaagtcctgatcactgttctggacgtg
aacgacaatgccccagaagtggtcctcacctctctcgccagctcggttcccgaaaactct
cccagagggacattaattgcccttttaaatgtaaatgaccaagattctgaggaaaacgga
caggtgatctgtttcatccaaggaaatctgccctttaaattagaaaaatcttacggaaat
tactatagtttagtcacagacatagtcttggatagggaacaggttcctagctacaacatc
acagtgaccgccactgaccggggaaccccgcccctatccacggaaactcatatctcgctg
aacgtggcagacaccaacgacaacccgccggtcttccctcaggcctcctattccgcttat
atcccagagaacaatcccagaggagtttccctcgtctctgtgaccgcccacgaccccgac
tgtgaagagaacgcccagatcacttattccctggctgagaacaccatccaaggggcaagc
ctatcgtcctacgtgtccatcaactccgacactggggtactgtatgcgctgagctccttc
gactacgagcagttccgagacttgcaagtgaaagtgatggcgcgggacaacgggcacccg
cccctcagcagcaacgtgtcgttgagcctgttcgtgctggaccagaacgacaatgcgccc
gagatcctgtaccccgccctccccacggacggttccactggcgtggagctggctccccgc
tccgcagagcccggctacctggtgaccaaggtggtggcggtggacagagactccggccag
aacgcctggctgtcctaccgtctgctcaaggccagcgagccgggactcttctcggtgggt
ctgcacacgggcgaggtgcgcacggcgcgagccctgctggacagagacgcgctcaagcag
agcctcgtagtggccgtccaggaccacggccagccccctctctccgccactgtcacgctc
accgtggccgtggccgacagcatcccccaagtcctggcggacctcggcagcctcgagtct
ccagctaactctgaaacctcagacctcactctgtacctggtggtagcggtggccgcggtc
tcctgcgtcttcctggccttcgtcatcttgctgctggcgctcaggctgcggcgctggcac
aagtcacgcctgctgcaggcttcaggaggcggcttgacaggagcgccggcgtcgcacttt
gtgggcgtggacggggtgcaggctttcctgcagacctattcccacgaggtttccctcacc
acggactcgcggaagagtcacctgatcttcccccagcccaactatgcagacatgctcgtc
agccaggagagctttgaaaaaagcgagccccttttgctgtcaggtgattcggtattttct
aaagacagtcatgggttaattgagcaagccccgcccaacacggactggcgtttctctcag
gcccagagacccggcaccagcggctcccaaaatggcgatgacaccggcacctggcccaac
aaccagtttgacacagagatgctgcaagccatgatcttggcgtccgccagtgaagctgct
gatgggagctccaccctgggagggggtgccggcaccatgggattgagcgcccgctacgga
ccccagttcaccctgcagcacgtgcccgactaccgccagaatgtctacatcccaggcagc
aatgccacactgaccaacgcagctggcaagcgggatggcaaggccccagcaggtggcaat
ggcaacaagaagaagtcgggcaagaaggagaagaagtaa

All links

Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (7)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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